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Published in: Tumor Biology 5/2016

01-05-2016 | Research Article

The relationship between five non-synonymous polymorphisms within three XRCC genes and gastric cancer risk in a Han Chinese population

Published in: Tumor Biology | Issue 5/2016

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Abstract

We aimed to assess the association of five non-synonymous polymorphisms within three X-ray repair cross-complementing group (XRCC) genes with gastric cancer risk in Han Chinese. Genotyping was determined in 693 gastric cancer patients and 681 healthy controls. Statistical analyses were completed with SPSS (version 20.0) and Haplo.stats (version 1.6.11). The genotypes of XRCC1 gene rs25487 polymorphism (P = 0.003) differed significantly between patients and controls, even after the Bonferroni correction (P < 0.05/5), and this polymorphism was significantly associated with gastric cancer after adjusting for age, sex, body mass index, smoking, drinking, especially under a dominant model (odds ratio or OR; 95 % confidence interval or CI; P 1.59; 1.20–2.00; 0.001). In multiple-marker analysis, the most common allele combination was C-G-G-G-C (alleles in order of rs1799782, rs25489, rs25487, rs3218536, rs861539), which was overrepresented in controls relative to patients (adjusted simulated P = 0.0001). Contrastingly, the frequency of allele combination C-G-A-G-C was significantly higher in patients than in controls (adjusted simulated P = 0.0009), and this combination was associated with a strikingly increased risk of gastric cancer (OR; 95 % CI; P 2.39; 1.32–4.31; 0.0040) after the Bonferroni correction (P < 0.05/11) and adjusting for confounders. Our findings demonstrated that XRCC1 gene rs25487 polymorphism might play a leading role in pronounced susceptibility to gastric cancer in Han Chinese.
Literature
1.
go back to reference Alli E, Sharma VB, Sunderesakumar P, Ford JM. Defective repair of oxidative dna damage in triple-negative breast cancer confers sensitivity to inhibition of poly(adp-ribose) polymerase. Cancer Res. 2009;69:3589–96.CrossRefPubMedPubMedCentral Alli E, Sharma VB, Sunderesakumar P, Ford JM. Defective repair of oxidative dna damage in triple-negative breast cancer confers sensitivity to inhibition of poly(adp-ribose) polymerase. Cancer Res. 2009;69:3589–96.CrossRefPubMedPubMedCentral
2.
go back to reference Orlow I, Park BJ, Mujumdar U, Patel H, Siu-Lau P, Clas BA, et al. DNA damage and repair capacity in patients with lung cancer: prediction of multiple primary tumors. J Clin Oncol. 2008;26:3560–6.CrossRefPubMedPubMedCentral Orlow I, Park BJ, Mujumdar U, Patel H, Siu-Lau P, Clas BA, et al. DNA damage and repair capacity in patients with lung cancer: prediction of multiple primary tumors. J Clin Oncol. 2008;26:3560–6.CrossRefPubMedPubMedCentral
3.
go back to reference Aggarwal M, Brosh Jr RM. Functional analyses of human DNA repair proteins important for aging and genomic stability using yeast genetics. DNA Repair (Amst). 2012;11:335–48.CrossRef Aggarwal M, Brosh Jr RM. Functional analyses of human DNA repair proteins important for aging and genomic stability using yeast genetics. DNA Repair (Amst). 2012;11:335–48.CrossRef
4.
go back to reference Babron MC, Kazma R, Gaborieau V, McKay J, Brennan P, Sarasin A, et al. Genetic variants in DNA repair pathways and risk of upper aerodigestive tract cancers: combined analysis of data from two genome-wide association studies in European populations. Carcinogenesis. 2014;35:1523–7.CrossRefPubMed Babron MC, Kazma R, Gaborieau V, McKay J, Brennan P, Sarasin A, et al. Genetic variants in DNA repair pathways and risk of upper aerodigestive tract cancers: combined analysis of data from two genome-wide association studies in European populations. Carcinogenesis. 2014;35:1523–7.CrossRefPubMed
5.
go back to reference Dizdaroglu M. Oxidatively induced DNA damage and its repair in cancer. Mutat Res Rev Mutat Res. 2015;763:212–45.CrossRefPubMed Dizdaroglu M. Oxidatively induced DNA damage and its repair in cancer. Mutat Res Rev Mutat Res. 2015;763:212–45.CrossRefPubMed
6.
go back to reference Qiao W, Wang T, Zhang L, Tang Q, Wang D, Sun H. Association study of single nucleotide polymorphisms in xrcc1 gene with the risk of gastric cancer in Chinese population. Int J Biol Sci. 2013;9:753–8.CrossRefPubMedPubMedCentral Qiao W, Wang T, Zhang L, Tang Q, Wang D, Sun H. Association study of single nucleotide polymorphisms in xrcc1 gene with the risk of gastric cancer in Chinese population. Int J Biol Sci. 2013;9:753–8.CrossRefPubMedPubMedCentral
7.
go back to reference Zhao DY, Cheng L, Yu J, Shen H. Xrcc1 genetic polymorphism arg339gln, arg194trp, arg280his and gastric cancer risk: an evidence based decision. Cancer Biomark. 2014;14:449–56.CrossRefPubMed Zhao DY, Cheng L, Yu J, Shen H. Xrcc1 genetic polymorphism arg339gln, arg194trp, arg280his and gastric cancer risk: an evidence based decision. Cancer Biomark. 2014;14:449–56.CrossRefPubMed
8.
go back to reference Perez LO, Crivaro A, Barbisan G, Poleri L, Golijow CD. Xrcc2 r188h (rs3218536), xrcc3 t241m (rs861539) and r243h (rs77381814) single nucleotide polymorphisms in cervical cancer risk. Pathol Oncol Res. 2013;19:553–8.CrossRefPubMed Perez LO, Crivaro A, Barbisan G, Poleri L, Golijow CD. Xrcc2 r188h (rs3218536), xrcc3 t241m (rs861539) and r243h (rs77381814) single nucleotide polymorphisms in cervical cancer risk. Pathol Oncol Res. 2013;19:553–8.CrossRefPubMed
9.
go back to reference Curtin K, Lin WY, George R, Katory M, Shorto J, Cannon-Albright LA, et al. Genetic variants in xrcc2: new insights into colorectal cancer tumorigenesis. Cancer Epidemiol Biomarkers Prev. 2009;18:2476–84.CrossRefPubMedPubMedCentral Curtin K, Lin WY, George R, Katory M, Shorto J, Cannon-Albright LA, et al. Genetic variants in xrcc2: new insights into colorectal cancer tumorigenesis. Cancer Epidemiol Biomarkers Prev. 2009;18:2476–84.CrossRefPubMedPubMedCentral
10.
go back to reference Qin XP, Zhou Y, Chen Y, Li NN, Wu XT. Xrcc3 thr241met polymorphism and gastric cancer susceptibility: a meta-analysis. Clin Res Hepatol Gastroenterol. 2014;38:226–34.CrossRefPubMed Qin XP, Zhou Y, Chen Y, Li NN, Wu XT. Xrcc3 thr241met polymorphism and gastric cancer susceptibility: a meta-analysis. Clin Res Hepatol Gastroenterol. 2014;38:226–34.CrossRefPubMed
11.
go back to reference McLean MH, El-Omar EM. Genetics of gastric cancer. Nat Rev Gastroenterol Hepatol. 2014;11:664–74.CrossRefPubMed McLean MH, El-Omar EM. Genetics of gastric cancer. Nat Rev Gastroenterol Hepatol. 2014;11:664–74.CrossRefPubMed
12.
go back to reference Martinet W, Knaapen MW, De Meyer GR, Herman AG, Kockx MM. Oxidative DNA damage and repair in experimental atherosclerosis are reversed by dietary lipid lowering. Circ Res. 2001;88:733–9.CrossRefPubMed Martinet W, Knaapen MW, De Meyer GR, Herman AG, Kockx MM. Oxidative DNA damage and repair in experimental atherosclerosis are reversed by dietary lipid lowering. Circ Res. 2001;88:733–9.CrossRefPubMed
13.
go back to reference Barrett JC, Fry B, Maller J, Daly MJ. Haploview: analysis and visualization of ld and haplotype maps. Bioinformatics. 2005;21:263–5.CrossRefPubMed Barrett JC, Fry B, Maller J, Daly MJ. Haploview: analysis and visualization of ld and haplotype maps. Bioinformatics. 2005;21:263–5.CrossRefPubMed
14.
go back to reference Yang TP, Beazley C, Montgomery SB, Dimas AS, Gutierrez-Arcelus M, Stranger BE, et al. Genevar: a database and java application for the analysis and visualization of snp-gene associations in eqtl studies. Bioinformatics. 2010;26:2474–6.CrossRefPubMedPubMedCentral Yang TP, Beazley C, Montgomery SB, Dimas AS, Gutierrez-Arcelus M, Stranger BE, et al. Genevar: a database and java application for the analysis and visualization of snp-gene associations in eqtl studies. Bioinformatics. 2010;26:2474–6.CrossRefPubMedPubMedCentral
15.
go back to reference Gok I, Baday M, Cetinkunar S, Kilic K, Bilgin BC. Polymorphisms in DNA repair genes xrcc2 and xrcc3 risk of gastric cancer in Turkey. Bosn J Basic Med Sci. 2014;14:214–8.CrossRefPubMedPubMedCentral Gok I, Baday M, Cetinkunar S, Kilic K, Bilgin BC. Polymorphisms in DNA repair genes xrcc2 and xrcc3 risk of gastric cancer in Turkey. Bosn J Basic Med Sci. 2014;14:214–8.CrossRefPubMedPubMedCentral
16.
go back to reference Wang Z, Chen X, Liu B, Li S, Liu M, Xue H. Quantitative assessment of the associations between DNA repair gene xrcc3 thr241met polymorphism and gastric cancer. Tumour Biol. 2014;35:1589–98.CrossRefPubMed Wang Z, Chen X, Liu B, Li S, Liu M, Xue H. Quantitative assessment of the associations between DNA repair gene xrcc3 thr241met polymorphism and gastric cancer. Tumour Biol. 2014;35:1589–98.CrossRefPubMed
17.
go back to reference Lee SG, Kim B, Choi J, Kim C, Lee I, Song K. Genetic polymorphisms of xrcc1 and risk of gastric cancer. Cancer Lett. 2002;187:53–60.CrossRefPubMed Lee SG, Kim B, Choi J, Kim C, Lee I, Song K. Genetic polymorphisms of xrcc1 and risk of gastric cancer. Cancer Lett. 2002;187:53–60.CrossRefPubMed
18.
go back to reference Abdel-Rahman O. Hedgehog pathway aberrations and gastric cancer; evaluation of prognostic impact and exploration of therapeutic potentials. Tumour Biol. 2015;36:1367–74.CrossRefPubMed Abdel-Rahman O. Hedgehog pathway aberrations and gastric cancer; evaluation of prognostic impact and exploration of therapeutic potentials. Tumour Biol. 2015;36:1367–74.CrossRefPubMed
19.
go back to reference Zhou J, Liu ZY, Li CB, Gao S, Ding LH, Wu XL, et al. Genetic polymorphisms of DNA repair pathways influence the response to chemotherapy and overall survival of gastric cancer. Tumour Biol. 2015;36:3017–23.CrossRefPubMed Zhou J, Liu ZY, Li CB, Gao S, Ding LH, Wu XL, et al. Genetic polymorphisms of DNA repair pathways influence the response to chemotherapy and overall survival of gastric cancer. Tumour Biol. 2015;36:3017–23.CrossRefPubMed
20.
go back to reference Boerner JL, Nechiporchik N, Mueller KL, Polin L, Heilbrun L, Boerner SA, et al. Protein expression of DNA damage repair proteins dictates response to topoisomerase and PARP inhibitors in triple-negative breast cancer. PLoS ONE. 2015;10:e0119614.CrossRefPubMedPubMedCentral Boerner JL, Nechiporchik N, Mueller KL, Polin L, Heilbrun L, Boerner SA, et al. Protein expression of DNA damage repair proteins dictates response to topoisomerase and PARP inhibitors in triple-negative breast cancer. PLoS ONE. 2015;10:e0119614.CrossRefPubMedPubMedCentral
22.
go back to reference Kim HM, Colaiacovo MP. New insights into the post-translational regulation of DNA damage response and double-strand break repair in caenorhabditis elegans. Genetics. 2015. Kim HM, Colaiacovo MP. New insights into the post-translational regulation of DNA damage response and double-strand break repair in caenorhabditis elegans. Genetics. 2015.
23.
go back to reference Dong H, Shi Q, Song X, Fu J, Hu L, Xu D, Su C, Xia X, Song E, Song Y. Polychlorinated biphenyl quinone induces oxidative DNA damage and repair responses: the activations of nhej, ber and ner via atm-p53 signaling axis. Toxicol Appl Pharmacol. 2015. Dong H, Shi Q, Song X, Fu J, Hu L, Xu D, Su C, Xia X, Song E, Song Y. Polychlorinated biphenyl quinone induces oxidative DNA damage and repair responses: the activations of nhej, ber and ner via atm-p53 signaling axis. Toxicol Appl Pharmacol. 2015.
24.
go back to reference Niu W, Qi Y, Hou S, Zhai X, Zhou W, Qiu C. Haplotype-based association of the renin-angiotensin-aldosterone system genes polymorphisms with essential hypertension among Han Chinese: The Fangshan Study. J Hypertens. 2009;27:1384–91.CrossRefPubMed Niu W, Qi Y, Hou S, Zhai X, Zhou W, Qiu C. Haplotype-based association of the renin-angiotensin-aldosterone system genes polymorphisms with essential hypertension among Han Chinese: The Fangshan Study. J Hypertens. 2009;27:1384–91.CrossRefPubMed
25.
go back to reference Bugawan TL, Angelini G, Larrick J, Auricchio S, Ferrara GB, Erlich HA. A combination of a particular hla-dp beta allele and an hla-dq heterodimer confers susceptibility to coeliac disease. Nature. 1989;339:470–3.CrossRefPubMed Bugawan TL, Angelini G, Larrick J, Auricchio S, Ferrara GB, Erlich HA. A combination of a particular hla-dp beta allele and an hla-dq heterodimer confers susceptibility to coeliac disease. Nature. 1989;339:470–3.CrossRefPubMed
26.
go back to reference Gai LP, Liu H, Cui JH, Ji N, Ding XD, Sun C, et al. Distributions of allele combination in single and cross loci among patients with several kinds of chronic diseases and the normal population. Genomics. 2015;105:168–74.CrossRefPubMed Gai LP, Liu H, Cui JH, Ji N, Ding XD, Sun C, et al. Distributions of allele combination in single and cross loci among patients with several kinds of chronic diseases and the normal population. Genomics. 2015;105:168–74.CrossRefPubMed
Metadata
Title
The relationship between five non-synonymous polymorphisms within three XRCC genes and gastric cancer risk in a Han Chinese population
Publication date
01-05-2016
Published in
Tumor Biology / Issue 5/2016
Print ISSN: 1010-4283
Electronic ISSN: 1423-0380
DOI
https://doi.org/10.1007/s13277-015-3502-3

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