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Published in: Neuroinformatics 4/2016

01-10-2016 | Software Original Article

PreSurgMapp: a MATLAB Toolbox for Presurgical Mapping of Eloquent Functional Areas Based on Task-Related and Resting-State Functional MRI

Authors: Huiyuan Huang, Zhongxiang Ding, Dewang Mao, Jianhua Yuan, Fangmei Zhu, Shuda Chen, Yan Xu, Lin Lou, Xiaoyan Feng, Le Qi, Wusi Qiu, Han Zhang, Yu-Feng Zang

Published in: Neuroinformatics | Issue 4/2016

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Abstract

The main goal of brain tumor surgery is to maximize tumor resection while minimizing the risk of irreversible postoperative functional sequelae. Eloquent functional areas should be delineated preoperatively, particularly for patients with tumors near eloquent areas. Functional magnetic resonance imaging (fMRI) is a noninvasive technique that demonstrates great promise for presurgical planning. However, specialized data processing toolkits for presurgical planning remain lacking. Based on several functions in open-source software such as Statistical Parametric Mapping (SPM), Resting-State fMRI Data Analysis Toolkit (REST), Data Processing Assistant for Resting-State fMRI (DPARSF) and Multiple Independent Component Analysis (MICA), here, we introduce an open-source MATLAB toolbox named PreSurgMapp. This toolbox can reveal eloquent areas using comprehensive methods and various complementary fMRI modalities. For example, PreSurgMapp supports both model-based (general linear model, GLM, and seed correlation) and data-driven (independent component analysis, ICA) methods and processes both task-based and resting-state fMRI data. PreSurgMapp is designed for highly automatic and individualized functional mapping with a user-friendly graphical user interface (GUI) for time-saving pipeline processing. For example, sensorimotor and language-related components can be automatically identified without human input interference using an effective, accurate component identification algorithm using discriminability index. All the results generated can be further evaluated and compared by neuro-radiologists or neurosurgeons. This software has substantial value for clinical neuro-radiology and neuro-oncology, including application to patients with low- and high-grade brain tumors and those with epilepsy foci in the dominant language hemisphere who are planning to undergo a temporal lobectomy.
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Metadata
Title
PreSurgMapp: a MATLAB Toolbox for Presurgical Mapping of Eloquent Functional Areas Based on Task-Related and Resting-State Functional MRI
Authors
Huiyuan Huang
Zhongxiang Ding
Dewang Mao
Jianhua Yuan
Fangmei Zhu
Shuda Chen
Yan Xu
Lin Lou
Xiaoyan Feng
Le Qi
Wusi Qiu
Han Zhang
Yu-Feng Zang
Publication date
01-10-2016
Publisher
Springer US
Published in
Neuroinformatics / Issue 4/2016
Print ISSN: 1539-2791
Electronic ISSN: 1559-0089
DOI
https://doi.org/10.1007/s12021-016-9304-y

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