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Published in: Brain Topography 3/2018

01-05-2018 | Original Paper

A Novel Group-Fused Sparse Partial Correlation Method for Simultaneous Estimation of Functional Networks in Group Comparison Studies

Authors: Xiaoyun Liang, David N. Vaughan, Alan Connelly, Fernando Calamante

Published in: Brain Topography | Issue 3/2018

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Abstract

The conventional way to estimate functional networks is primarily based on Pearson correlation along with classic Fisher Z test. In general, networks are usually calculated at the individual-level and subsequently aggregated to obtain group-level networks. However, such estimated networks are inevitably affected by the inherent large inter-subject variability. A joint graphical model with Stability Selection (JGMSS) method was recently shown to effectively reduce inter-subject variability, mainly caused by confounding variations, by simultaneously estimating individual-level networks from a group. However, its benefits might be compromised when two groups are being compared, given that JGMSS is blinded to other groups when it is applied to estimate networks from a given group. We propose a novel method for robustly estimating networks from two groups by using group-fused multiple graphical-lasso combined with stability selection, named GMGLASS. Specifically, by simultaneously estimating similar within-group networks and between-group difference, it is possible to address inter-subject variability of estimated individual networks inherently related with existing methods such as Fisher Z test, and issues related to JGMSS ignoring between-group information in group comparisons. To evaluate the performance of GMGLASS in terms of a few key network metrics, as well as to compare with JGMSS and Fisher Z test, they are applied to both simulated and in vivo data. As a method aiming for group comparison studies, our study involves two groups for each case, i.e., normal control and patient groups; for in vivo data, we focus on a group of patients with right mesial temporal lobe epilepsy.
Appendix
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Footnotes
1
Note that comparisons to partial correlation based on inverse covariance matrix using L1 regularization is less relevant due to the limitation of L1-norm Liang et al. (2016). A novel joint sparse partial correlation method for estimating group functional networks. Hum Brain Mapp, 37, 1162–77; they were therefore not included in the comparison study.
 
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Metadata
Title
A Novel Group-Fused Sparse Partial Correlation Method for Simultaneous Estimation of Functional Networks in Group Comparison Studies
Authors
Xiaoyun Liang
David N. Vaughan
Alan Connelly
Fernando Calamante
Publication date
01-05-2018
Publisher
Springer US
Published in
Brain Topography / Issue 3/2018
Print ISSN: 0896-0267
Electronic ISSN: 1573-6792
DOI
https://doi.org/10.1007/s10548-017-0615-6

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