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Published in: Journal of Digital Imaging 1/2012

01-02-2012

Development of Automated Detection of Radiology Reports Citing Adrenal Findings

Authors: Jason J. Zopf, Jessica M. Langer, William W. Boonn, Woojin Kim, Hanna M. Zafar

Published in: Journal of Imaging Informatics in Medicine | Issue 1/2012

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Abstract

The aim of this study was to determine the feasibility of automated detection of adrenal nodules, a common finding on CT, using a newly developed search engine that mines dictated radiology reports. To ensure Health Insurance Portability and Accountability Act compliance, we utilized a preexisting de-identified database of 32,974 CT reports from February 1, 2009 to February 28, 2010. Common adrenal descriptors from 29 staff radiologists were used to develop an automated rule-based algorithm targeting adrenal findings. Each sentence within the free text of reports was searched with an adapted NegEx negation algorithm. The algorithm was refined using a 2-week test period of reports and subsequently validated using a 6-week period. Manual review of the 3,693 CT reports in the validation period identified 222 positive reports while the algorithm detected 238 positive reports. The algorithm identified one true positive report missed on manual review for a total of 223 true positive reports. This resulted in a precision of 91% (217 of 238) and a recall of 97% (217 of 223). The sensitivity of the query was 97.3% (95% confidence interval (CI), 93.9–98.9%), and the specificity was 99.3% (95% CI, 99.1–99.6%). The positive predictive value of the algorithm was 91.0% (95% CI, 86.6–94.3%), and the negative predictive value was 99.8% (95% CI, 99.6–99.9%). The prevalence of true positive adrenal findings identified by the query (7.1%) was nearly identical to the true prevalence (7.2%). Automated detection of language describing common findings in imaging reports, such as adrenal nodules on CT, is feasible.
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Literature
1.
go back to reference Kloos RT, et al: Incidentally discovered adrenal masses. Endocr Rev 16(4):460–484, 1995PubMed Kloos RT, et al: Incidentally discovered adrenal masses. Endocr Rev 16(4):460–484, 1995PubMed
2.
go back to reference Song JH, Chaudhry FS, Mayo-Smith WW: The incidental adrenal mass on CT: prevalence of adrenal disease in 1,049 consecutive adrenal masses in patients with no known malignancy. AJR Am J Roentgenol 190(5):1163–1168, 2008PubMedCrossRef Song JH, Chaudhry FS, Mayo-Smith WW: The incidental adrenal mass on CT: prevalence of adrenal disease in 1,049 consecutive adrenal masses in patients with no known malignancy. AJR Am J Roentgenol 190(5):1163–1168, 2008PubMedCrossRef
3.
go back to reference Song JH, Chaudhry FS, Mayo-Smith WW: The incidental indeterminate adrenal mass on CT (>10 H) in patients without cancer: is further imaging necessary? Follow-up of 321 consecutive indeterminate adrenal masses. AJR Am J Roentgenol 189(5):1119–1123, 2007PubMedCrossRef Song JH, Chaudhry FS, Mayo-Smith WW: The incidental indeterminate adrenal mass on CT (>10 H) in patients without cancer: is further imaging necessary? Follow-up of 321 consecutive indeterminate adrenal masses. AJR Am J Roentgenol 189(5):1119–1123, 2007PubMedCrossRef
4.
go back to reference Grumbach MM, et al: Management of the clinically inapparent adrenal mass (“incidentaloma”). Ann Intern Med 138(5):424–429, 2003PubMed Grumbach MM, et al: Management of the clinically inapparent adrenal mass (“incidentaloma”). Ann Intern Med 138(5):424–429, 2003PubMed
5.
go back to reference Berland LL, et al: Managing incidental findings on abdominal CT: white paper of the ACR incidental findings committee. J Am Coll Radiol 7(10):754–773, 2010PubMedCrossRef Berland LL, et al: Managing incidental findings on abdominal CT: white paper of the ACR incidental findings committee. J Am Coll Radiol 7(10):754–773, 2010PubMedCrossRef
7.
go back to reference Zeiger MA, et al: The American Association of Clinical Endocrinologists and American Association of Endocrine Surgeons medical guidelines for the management of adrenal incidentalomas. Endocr Pract 15(Suppl 1):1–20, 2009PubMed Zeiger MA, et al: The American Association of Clinical Endocrinologists and American Association of Endocrine Surgeons medical guidelines for the management of adrenal incidentalomas. Endocr Pract 15(Suppl 1):1–20, 2009PubMed
8.
go back to reference Graham DJ, McHenry CR: The adrenal incidentaloma: guidelines for evaluation and recommendations for management. Surg Oncol Clin N Am 7(4):749–764, 1998PubMed Graham DJ, McHenry CR: The adrenal incidentaloma: guidelines for evaluation and recommendations for management. Surg Oncol Clin N Am 7(4):749–764, 1998PubMed
9.
go back to reference Swanson DR: Searching natural language text by computer. Machine indexing and text searching offer an approach to the basic problems of library automation. Science 132:1099–1104, 1960PubMedCrossRef Swanson DR: Searching natural language text by computer. Machine indexing and text searching offer an approach to the basic problems of library automation. Science 132:1099–1104, 1960PubMedCrossRef
10.
go back to reference Friedman C, Hripcsak G: Natural language processing and its future in medicine. Acad Med 74(8):890–895, 1999PubMedCrossRef Friedman C, Hripcsak G: Natural language processing and its future in medicine. Acad Med 74(8):890–895, 1999PubMedCrossRef
11.
go back to reference Hripcsak G, et al: Unlocking clinical data from narrative reports: a study of natural language processing. Ann Intern Med 122(9):681–688, 1995PubMed Hripcsak G, et al: Unlocking clinical data from narrative reports: a study of natural language processing. Ann Intern Med 122(9):681–688, 1995PubMed
12.
go back to reference Sager N, et al: Natural language processing and the representation of clinical data. J Am Med Inform Assoc 1(2):142–160, 1994PubMedCrossRef Sager N, et al: Natural language processing and the representation of clinical data. J Am Med Inform Assoc 1(2):142–160, 1994PubMedCrossRef
13.
go back to reference Langlotz CP: Automatic structuring of radiology reports: harbinger of a second information revolution in radiology. Radiology 224(1):5–7, 2002PubMedCrossRef Langlotz CP: Automatic structuring of radiology reports: harbinger of a second information revolution in radiology. Radiology 224(1):5–7, 2002PubMedCrossRef
14.
go back to reference Elkin PL, et al: A controlled trial of automated classification of negation from clinical notes. BMC Med Inform Decis Mak 5:13, 2005PubMedCrossRef Elkin PL, et al: A controlled trial of automated classification of negation from clinical notes. BMC Med Inform Decis Mak 5:13, 2005PubMedCrossRef
15.
go back to reference Huang Y, Lowe HJ: A novel hybrid approach to automated negation detection in clinical radiology reports. J Am Med Inform Assoc 14(3):304–311, 2007PubMedCrossRef Huang Y, Lowe HJ: A novel hybrid approach to automated negation detection in clinical radiology reports. J Am Med Inform Assoc 14(3):304–311, 2007PubMedCrossRef
16.
go back to reference Mutalik PG, Deshpande A, Nadkarni PM: Use of general-purpose negation detection to augment concept indexing of medical documents: a quantitative study using the UMLS. J Am Med Inform Assoc 8(6):598–609, 2001PubMedCrossRef Mutalik PG, Deshpande A, Nadkarni PM: Use of general-purpose negation detection to augment concept indexing of medical documents: a quantitative study using the UMLS. J Am Med Inform Assoc 8(6):598–609, 2001PubMedCrossRef
17.
go back to reference Benitah N, et al: Minor morphologic abnormalities of adrenal glands at CT: prognostic importance in patients with lung cancer. Radiology 235(2):517–522, 2005PubMedCrossRef Benitah N, et al: Minor morphologic abnormalities of adrenal glands at CT: prognostic importance in patients with lung cancer. Radiology 235(2):517–522, 2005PubMedCrossRef
18.
go back to reference Chapman WW, et al: A simple algorithm for identifying negated findings and diseases in discharge summaries. J Biomed Inform 34(5):301–310, 2001PubMedCrossRef Chapman WW, et al: A simple algorithm for identifying negated findings and diseases in discharge summaries. J Biomed Inform 34(5):301–310, 2001PubMedCrossRef
19.
go back to reference Aronow DB, Fangfang F, Croft WB: Ad hoc classification of radiology reports. J Am Med Inform Assoc 6(5):393–411, 1999PubMedCrossRef Aronow DB, Fangfang F, Croft WB: Ad hoc classification of radiology reports. J Am Med Inform Assoc 6(5):393–411, 1999PubMedCrossRef
20.
go back to reference Vella A, Nippoldt TB, Morris 3rd, JC: Adrenal hemorrhage: a 25-year experience at the Mayo Clinic. Mayo Clin Proc 76(2):161–168, 2001PubMedCrossRef Vella A, Nippoldt TB, Morris 3rd, JC: Adrenal hemorrhage: a 25-year experience at the Mayo Clinic. Mayo Clin Proc 76(2):161–168, 2001PubMedCrossRef
21.
go back to reference Bovio S, et al: Prevalence of adrenal incidentaloma in a contemporary computerized tomography series. J Endocrinol Invest 29(4):298–302, 2006PubMed Bovio S, et al: Prevalence of adrenal incidentaloma in a contemporary computerized tomography series. J Endocrinol Invest 29(4):298–302, 2006PubMed
22.
go back to reference Hedeland H, Ostberg G, Hokfelt B: On the prevalence of adrenocortical adenomas in an autopsy material in relation to hypertension and diabetes. Acta Med Scand 184(3):211–214, 1968PubMed Hedeland H, Ostberg G, Hokfelt B: On the prevalence of adrenocortical adenomas in an autopsy material in relation to hypertension and diabetes. Acta Med Scand 184(3):211–214, 1968PubMed
Metadata
Title
Development of Automated Detection of Radiology Reports Citing Adrenal Findings
Authors
Jason J. Zopf
Jessica M. Langer
William W. Boonn
Woojin Kim
Hanna M. Zafar
Publication date
01-02-2012
Publisher
Springer-Verlag
Published in
Journal of Imaging Informatics in Medicine / Issue 1/2012
Print ISSN: 2948-2925
Electronic ISSN: 2948-2933
DOI
https://doi.org/10.1007/s10278-011-9425-7

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