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Published in: Journal of Digital Imaging 4/2005

01-12-2005

Technical Report on Semiautomatic Segmentation Using the Adobe Photoshop

Authors: Jin Seo Park, Min Suk Chung, Sung Bae Hwang, Yong Sook Lee, Dong-Hwan Har

Published in: Journal of Imaging Informatics in Medicine | Issue 4/2005

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Abstract

The purpose of this research is to enable users to semiautomatically segment the anatomical structures in magnetic resonance images (MRIs), computerized tomographs (CTs), and other medical images on a personal computer. The segmented images are used for making 3D images, which are helpful to medical education and research. To achieve this purpose, the following trials were performed. The entire body of a volunteer was scanned to make 557 MRIs. On Adobe Photoshop, contours of 19 anatomical structures in the MRIs were semiautomatically drawn using MAGNETIC LASSO TOOL and manually corrected using either LASSO TOOL or DIRECT SELECTION TOOL to make 557 segmented images. In a similar manner, 13 anatomical structures in 8,590 anatomical images were segmented. Proper segmentation was verified by making 3D images from the segmented images. Semiautomatic segmentation using Adobe Photoshop is expected to be widely used for segmentation of anatomical structures in various medical images.
Literature
1.
go back to reference Kerr, JP, Knapp, D, Frake, B, Sellberg, M 2000True color surface anatomy. Mapping the Visible Human to patient-specific CT dataComput Med Imaging Graph24153164CrossRefPubMed Kerr, JP, Knapp, D, Frake, B, Sellberg, M 2000True color surface anatomy. Mapping the Visible Human to patient-specific CT dataComput Med Imaging Graph24153164CrossRefPubMed
2.
go back to reference Sachse, FB, Werner, CD, Meyer-Waarden, K, Dössel, O 2000Development of a human body model for numerical calculation of electrical fieldsComput Med Imaging Graph24165171CrossRefPubMed Sachse, FB, Werner, CD, Meyer-Waarden, K, Dössel, O 2000Development of a human body model for numerical calculation of electrical fieldsComput Med Imaging Graph24165171CrossRefPubMed
3.
go back to reference Hosono, M, Nakano, Y, Urayama, S, Konishi, J, Uokawa, K, Tanaka, Y 1995Three-dimensional display of cardiac structures using reconstructed magnetic resonance imagingJ Digit Imaging8105115PubMed Hosono, M, Nakano, Y, Urayama, S, Konishi, J, Uokawa, K, Tanaka, Y 1995Three-dimensional display of cardiac structures using reconstructed magnetic resonance imagingJ Digit Imaging8105115PubMed
4.
go back to reference Qin, X, Ou, Z, Zhang, Y, Hou, J 2002Data structure representation of 3D reconstruction system of medical images and surface model constructionSheng Wu Yi Xue Gong Cheng Xue Za Zhi19239243PubMed Qin, X, Ou, Z, Zhang, Y, Hou, J 2002Data structure representation of 3D reconstruction system of medical images and surface model constructionSheng Wu Yi Xue Gong Cheng Xue Za Zhi19239243PubMed
5.
go back to reference Uokawa, K, Nakano, Y, Urayama, S, Uyama, C, Kurokawa, K, Ikeda, K, Koito, H, Tanaka, Y 1997An improved computer methods to prepare 3D magnetic resonance images of thoracic structuresJ Digit Imaging108595PubMed Uokawa, K, Nakano, Y, Urayama, S, Uyama, C, Kurokawa, K, Ikeda, K, Koito, H, Tanaka, Y 1997An improved computer methods to prepare 3D magnetic resonance images of thoracic structuresJ Digit Imaging108595PubMed
6.
go back to reference Anderson, JR, Wilcox, MJ, Barrett, SF 2002Image processing and 3D reconstruction of serial section micrographs from Musca domestica's biological cells responsible for visual processingBiomed Sci Instrum38363368PubMed Anderson, JR, Wilcox, MJ, Barrett, SF 2002Image processing and 3D reconstruction of serial section micrographs from Musca domestica's biological cells responsible for visual processingBiomed Sci Instrum38363368PubMed
7.
go back to reference Nip W, Logan C: Whole frog technical report Web site http://www-itg.lbl.gov/ITG.hm.pg.docs/Whole.Frog/Whole.Frog.html). Accessed August 11, 2004. Nip W, Logan C: Whole frog technical report Web site http://​www-itg.​lbl.​gov/​ITG.​hm.​pg.​docs/​Whole.​Frog/​Whole.​Frog.​html). Accessed August 11, 2004.
8.
go back to reference Quackenbush D, Ratiu P, Kerr J: Segmentation of the Visible Human datasets. The Visible Human Project Conference Proceeding, October 7 and 8, 1996 Quackenbush D, Ratiu P, Kerr J: Segmentation of the Visible Human datasets. The Visible Human Project Conference Proceeding, October 7 and 8, 1996
9.
go back to reference Xu, L, Chen, Y, Yang, H 2000Digital photography and blurred image processing of retinal nerve fiber layer in glaucomaZhonghua Yan Ke Za Zhi36410412PubMed Xu, L, Chen, Y, Yang, H 2000Digital photography and blurred image processing of retinal nerve fiber layer in glaucomaZhonghua Yan Ke Za Zhi36410412PubMed
10.
go back to reference Spitzer, VM, Whitlock, DG 1998Atlas of the Visible Human Male. Reverse Engineering of the Human BodyJones and Bartlett PublishersMassachusetts Spitzer, VM, Whitlock, DG 1998Atlas of the Visible Human Male. Reverse Engineering of the Human BodyJones and Bartlett PublishersMassachusetts
11.
go back to reference Dean, D, Herbener, TE 2000Cross-Sectional Human AnatomyLippincott Williams & WilkinsBaltimore, MD Dean, D, Herbener, TE 2000Cross-Sectional Human AnatomyLippincott Williams & WilkinsBaltimore, MD
12.
go back to reference Spitzer, VM, Ackerman, MJ, Scherizinger, AL, Whitlock, DG 1996The Visible Human male. Technical reportJ Am Med Inform Assoc3118130PubMed Spitzer, VM, Ackerman, MJ, Scherizinger, AL, Whitlock, DG 1996The Visible Human male. Technical reportJ Am Med Inform Assoc3118130PubMed
13.
go back to reference Park, JS, Chung, MS, Hwang, SB, Lee, YS, Har, DH, Park, HS 2005Visible Korean Human. Improved serially sectioned images of the entire bodyIEEE Trans Med Imaging24352360CrossRefPubMed Park, JS, Chung, MS, Hwang, SB, Lee, YS, Har, DH, Park, HS 2005Visible Korean Human. Improved serially sectioned images of the entire bodyIEEE Trans Med Imaging24352360CrossRefPubMed
14.
go back to reference Pommert, A, Höhne, KH, Pflesser, B, Richter, E, Riemer, M, Schiemann, T, Schubert, R, Schumacher, U, Tiede, U 2001Creating a high-resolution spatial/symbolic model of the inner organs based on the Visible HumanMed Image Anal5221228CrossRefPubMed Pommert, A, Höhne, KH, Pflesser, B, Richter, E, Riemer, M, Schiemann, T, Schubert, R, Schumacher, U, Tiede, U 2001Creating a high-resolution spatial/symbolic model of the inner organs based on the Visible HumanMed Image Anal5221228CrossRefPubMed
15.
go back to reference Schiemann, T, Freudenberg, J, Pflesser, B, Pommert, A, Priesmeyer, K, Riemer, M, Schubert, R, Tiede, U, Höhne, KH 2000Exploring the Visible Human using the VOXEL-MAN frameworkComput Med Imaging Graph24127132CrossRefPubMed Schiemann, T, Freudenberg, J, Pflesser, B, Pommert, A, Priesmeyer, K, Riemer, M, Schubert, R, Tiede, U, Höhne, KH 2000Exploring the Visible Human using the VOXEL-MAN frameworkComput Med Imaging Graph24127132CrossRefPubMed
Metadata
Title
Technical Report on Semiautomatic Segmentation Using the Adobe Photoshop
Authors
Jin Seo Park
Min Suk Chung
Sung Bae Hwang
Yong Sook Lee
Dong-Hwan Har
Publication date
01-12-2005
Publisher
Springer-Verlag
Published in
Journal of Imaging Informatics in Medicine / Issue 4/2005
Print ISSN: 2948-2925
Electronic ISSN: 2948-2933
DOI
https://doi.org/10.1007/s10278-005-6704-1

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