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Published in: International Journal of Legal Medicine 6/2016

01-11-2016 | Population Data

Genetic variation of 17 STR loci in a Mexican Mestizo population from Mexico City

Authors: Maria Saiz, Ricardo Jesús Rios-Rivas, Juan Carlos Alvarez, José Antonio Lorente, Dora Villegas-Carmona, Erika Ramirez-Flores, Lourdes Vega-Navarrete

Published in: International Journal of Legal Medicine | Issue 6/2016

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Abstract

Genetic data from 17 autosomal short tandem repeat (STR) loci found in the Powerplex® ESX 17 System (Promega, Madison, WI, USA) was evaluated in 162 unrelated Mexican Mestizo individuals from Mexico City. Allele frequencies and forensic parameters were estimated for the 17 STRs. All loci analyzed were in Hardy-Weinberg equilibrium in the studied population and showed not any signs of linkage between loci. The combined power of discrimination and the power of exclusion for the 16 aSTRs studied were 1–2.56409·10−19 and 99.999938 %, respectively. Genetic distances reveal a close relationship within different populations of Mexican Mestizos. The obtained data might be useful for population genetics research and for individual identification and paternity testing in forensic science.
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Literature
1.
go back to reference Instituto Nacional de Estadística y Geografía (2010) Censo de Población y Vivienda 2010. México Instituto Nacional de Estadística y Geografía (2010) Censo de Población y Vivienda 2010. México
2.
go back to reference Juárez-Cedillo T, Zuñiga J, Acuña-Alonzo V, et al. (2008) Genetic admixture and diversity estimations in the Mexican Mestizo population from Mexico City using 15 STR polymorphic markers. Forensic Sci Int Genet 2:e37–e39CrossRefPubMed Juárez-Cedillo T, Zuñiga J, Acuña-Alonzo V, et al. (2008) Genetic admixture and diversity estimations in the Mexican Mestizo population from Mexico City using 15 STR polymorphic markers. Forensic Sci Int Genet 2:e37–e39CrossRefPubMed
5.
go back to reference Bär W, Brinkmann B, Budowle B, et al. (1997) DNA recommendations. Further report of the DNA commission of the ISFG regarding the use of short tandem repeat systems. Forenic Sci Int 87:179–184CrossRef Bär W, Brinkmann B, Budowle B, et al. (1997) DNA recommendations. Further report of the DNA commission of the ISFG regarding the use of short tandem repeat systems. Forenic Sci Int 87:179–184CrossRef
6.
go back to reference Excoffier L, Lischer H (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10:564–567CrossRefPubMed Excoffier L, Lischer H (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10:564–567CrossRefPubMed
7.
go back to reference Tereba, A (2001) Tools for Analysis of Population Statistics. Profiles DNA Tereba, A (2001) Tools for Analysis of Population Statistics. Profiles DNA
8.
go back to reference Felsenstein J (2004) PHYLIP (Phylogeny Inference Package), version 3.62 [computer program]. Dep. Genome Sci. Univ. Washingt Felsenstein J (2004) PHYLIP (Phylogeny Inference Package), version 3.62 [computer program]. Dep. Genome Sci. Univ. Washingt
9.
go back to reference Gorostiza A, González-Martín A, Ramírez CL, et al. (2007) Allele frequencies of the 15 AmpF/Str Identifiler loci in the population of Metztitlán (Estado de Hidalgo), México. Forensic Sci Int 166:230–232CrossRefPubMed Gorostiza A, González-Martín A, Ramírez CL, et al. (2007) Allele frequencies of the 15 AmpF/Str Identifiler loci in the population of Metztitlán (Estado de Hidalgo), México. Forensic Sci Int 166:230–232CrossRefPubMed
10.
go back to reference Rubi-Castellanos R, Anaya-Palafox M, Mena-Rojas E, et al. (2009) Genetic data of 15 autosomal STRs (Identifiler kit) of three Mexican Mestizo population samples from the States of Jalisco (West), Puebla (Center), and Yucatan (Southeast). Forensic Sci Int Genet 3:e71–e76CrossRefPubMed Rubi-Castellanos R, Anaya-Palafox M, Mena-Rojas E, et al. (2009) Genetic data of 15 autosomal STRs (Identifiler kit) of three Mexican Mestizo population samples from the States of Jalisco (West), Puebla (Center), and Yucatan (Southeast). Forensic Sci Int Genet 3:e71–e76CrossRefPubMed
11.
go back to reference Martínez-Sevilla VM, Aguilar-Velázquez JA, Inclán-Sánchez A, et al. (2016) Parámetros forenses del sistema Powerplex® 21 (Promega Corp.) en población mestiza del occidente de México. Rev Española Med Leg 42:10–16. doi:10.1016/j.reml.2015.03.001 CrossRef Martínez-Sevilla VM, Aguilar-Velázquez JA, Inclán-Sánchez A, et al. (2016) Parámetros forenses del sistema Powerplex® 21 (Promega Corp.) en población mestiza del occidente de México. Rev Española Med Leg 42:10–16. doi:10.​1016/​j.​reml.​2015.​03.​001 CrossRef
12.
go back to reference Rangel-Villalobos H, Muñoz-Rivas CD, Martínez-Sevilla VM, et al. (2014) Forensic evaluation of the AmpFℓSTR Identifiler kit in nine Mexican native populations from the pre-Columbian Mesoamerican region. Int J Legal Med 128:467–468. doi:10.1007/s00414-013-0956-y CrossRefPubMed Rangel-Villalobos H, Muñoz-Rivas CD, Martínez-Sevilla VM, et al. (2014) Forensic evaluation of the AmpFℓSTR Identifiler kit in nine Mexican native populations from the pre-Columbian Mesoamerican region. Int J Legal Med 128:467–468. doi:10.​1007/​s00414-013-0956-y CrossRefPubMed
Metadata
Title
Genetic variation of 17 STR loci in a Mexican Mestizo population from Mexico City
Authors
Maria Saiz
Ricardo Jesús Rios-Rivas
Juan Carlos Alvarez
José Antonio Lorente
Dora Villegas-Carmona
Erika Ramirez-Flores
Lourdes Vega-Navarrete
Publication date
01-11-2016
Publisher
Springer Berlin Heidelberg
Published in
International Journal of Legal Medicine / Issue 6/2016
Print ISSN: 0937-9827
Electronic ISSN: 1437-1596
DOI
https://doi.org/10.1007/s00414-016-1423-3

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