Skip to main content
Top
Published in: Acta Neuropathologica 4/2010

Open Access 01-04-2010 | Original Paper

The prognostic IDH1 R132 mutation is associated with reduced NADP+-dependent IDH activity in glioblastoma

Authors: Fonnet E. Bleeker, Nadia A. Atai, Simona Lamba, Ard Jonker, Denise Rijkeboer, Klazien S. Bosch, Wikky Tigchelaar, Dirk Troost, W. Peter Vandertop, Alberto Bardelli, Cornelis J. F. Van Noorden

Published in: Acta Neuropathologica | Issue 4/2010

Login to get access

Abstract

Somatic mutations in the isocitrate dehydrogenase 1 gene (IDH1) occur at high frequency in gliomas and seem to be a prognostic factor for survival in glioblastoma patients. In our set of 98 glioblastoma patients, IDH1 R132 mutations were associated with improved survival of 1 year on average, after correcting for age and other variables with Cox proportional hazards models. Patients with IDH1 mutations were on average 17 years younger than patients without mutation. Mutated IDH1 has a gain of function to produce 2-hydroxyglutarate by NADPH-dependent reduction of α-ketoglutarate, but it is unknown whether NADPH production in gliomas is affected by IDH1 mutations. We assessed the effect of IDH1 R132 mutations on IDH-mediated NADPH production in glioblastomas in situ. Metabolic mapping and image analysis was applied to 51 glioblastoma samples of which 16 carried an IDH1 R132 mutation. NADP+-dependent IDH activity was determined in comparison with activity of NAD+-dependent IDH and all other NADPH-producing dehydrogenases, glucose-6-phosphate dehydrogenase, 6-phosphogluconate dehydrogenase, malate dehydrogenase, and hexose-6-phosphate dehydrogenase. The occurrence of IDH1 mutations correlated with approx. twofold diminished NADP+-dependent IDH activity, whereas activity of NAD+-dependent IDH and the other NADP+-dependent dehydrogenases was not affected in situ in glioblastoma. The total NADPH production capacity in glioblastoma was provided for 65% by IDH activity and the occurrence of IDH1 R132 mutation reduced this capacity by 38%. It is concluded that NADPH production is hampered in glioblastoma with IDH1 R132 mutation. Moreover, mutated IDH1 consumes rather than produces NADPH, thus likely lowering NADPH levels even further. The low NADPH levels may sensitize glioblastoma to irradiation and chemotherapy, thus explaining the prolonged survival of patients with mutated glioblastoma.
Literature
1.
go back to reference Aghili M, Zahedi F, Rafiee E (2009) Hydroxyglutaric aciduria and malignant brain tumor: a case report and literature review. J Neurooncol 91:233–236CrossRefPubMed Aghili M, Zahedi F, Rafiee E (2009) Hydroxyglutaric aciduria and malignant brain tumor: a case report and literature review. J Neurooncol 91:233–236CrossRefPubMed
2.
go back to reference Balakrishnan A, Bleeker FE, Lamba S et al (2007) Novel somatic and germline mutations in cancer candidate genes in glioblastoma, melanoma, and pancreatic carcinoma. Cancer Res 67:3545–3550CrossRefPubMed Balakrishnan A, Bleeker FE, Lamba S et al (2007) Novel somatic and germline mutations in cancer candidate genes in glioblastoma, melanoma, and pancreatic carcinoma. Cancer Res 67:3545–3550CrossRefPubMed
3.
go back to reference Balss J, Meyer J, Mueller W et al (2008) Analysis of the IDH1 codon 132 mutation in brain tumors. Acta Neuropathol 116:597–602CrossRefPubMed Balss J, Meyer J, Mueller W et al (2008) Analysis of the IDH1 codon 132 mutation in brain tumors. Acta Neuropathol 116:597–602CrossRefPubMed
4.
go back to reference Biaglow JE, Miller RA (2005) The thioredoxin reductase/thioredoxin system. Cancer Biol Ther 4:6–13PubMedCrossRef Biaglow JE, Miller RA (2005) The thioredoxin reductase/thioredoxin system. Cancer Biol Ther 4:6–13PubMedCrossRef
5.
go back to reference Bleeker FE, Lamba S, Leenstra S et al (2009) IDH1 mutations at residue p.R132 (IDH1(R132)) occur frequently in high-grade gliomas but not in other solid tumors. Hum Mutat 30:7–11CrossRefPubMed Bleeker FE, Lamba S, Leenstra S et al (2009) IDH1 mutations at residue p.R132 (IDH1(R132)) occur frequently in high-grade gliomas but not in other solid tumors. Hum Mutat 30:7–11CrossRefPubMed
6.
go back to reference Butcher RG, Van Noorden CJF (1985) Reaction rate studies of glucose-6-phosphate dehydrogenase activity in sections of rat liver using four tetrazolium salts. Histochem J 17:993–1008CrossRefPubMed Butcher RG, Van Noorden CJF (1985) Reaction rate studies of glucose-6-phosphate dehydrogenase activity in sections of rat liver using four tetrazolium salts. Histochem J 17:993–1008CrossRefPubMed
7.
go back to reference Chieco P, Jonker A, Melchiorri C et al (1994) A user’s guide for avoiding errors in absorbance image cytometry: a review with original experimental observations. Histochem J 26:1–19PubMed Chieco P, Jonker A, Melchiorri C et al (1994) A user’s guide for avoiding errors in absorbance image cytometry: a review with original experimental observations. Histochem J 26:1–19PubMed
8.
go back to reference Dang L, White DW, Gross S et al (2009) Cancer-associated IDH1 mutations produce 2-hydroxyglutarate. Nature 462:739–747CrossRefPubMed Dang L, White DW, Gross S et al (2009) Cancer-associated IDH1 mutations produce 2-hydroxyglutarate. Nature 462:739–747CrossRefPubMed
9.
go back to reference Geisbrecht BV, Gould SJ (1999) The human PICD gene encodes a cytoplasmic and peroxisomal NADP(+)-dependent isocitrate dehydrogenase. J Biol Chem 274:30527–30533CrossRefPubMed Geisbrecht BV, Gould SJ (1999) The human PICD gene encodes a cytoplasmic and peroxisomal NADP(+)-dependent isocitrate dehydrogenase. J Biol Chem 274:30527–30533CrossRefPubMed
10.
go back to reference Hartmann C, Meyer J, Balss J et al (2009) Type and frequency of IDH1 and IDH2 mutations are related to astrocytic and oligodendroglial differentiation and age: a study of 1,010 diffuse gliomas. Acta Neuropathol 118:469–474CrossRefPubMed Hartmann C, Meyer J, Balss J et al (2009) Type and frequency of IDH1 and IDH2 mutations are related to astrocytic and oligodendroglial differentiation and age: a study of 1,010 diffuse gliomas. Acta Neuropathol 118:469–474CrossRefPubMed
11.
go back to reference Hughes JM, Groot AJ, Van der Groep P et al (2009) Active HIF-1 in the normal human retina. J Histochem Cytochem PMID 19901273 Hughes JM, Groot AJ, Van der Groep P et al (2009) Active HIF-1 in the normal human retina. J Histochem Cytochem PMID 19901273
12.
go back to reference Ichimura K, Pearson DM, Kocialkowski S et al (2009) IDH1 mutations are present in the majority of common adult gliomas but rare in primary glioblastomas. Neuro Oncol 11:341–347CrossRefPubMed Ichimura K, Pearson DM, Kocialkowski S et al (2009) IDH1 mutations are present in the majority of common adult gliomas but rare in primary glioblastomas. Neuro Oncol 11:341–347CrossRefPubMed
13.
go back to reference Kim SY, Lee SM, Tak JK et al (2007) Regulation of singlet oxygen-induced apoptosis by cytosolic NADP+-dependent isocitrate dehydrogenase. Mol Cell Biochem 302:27–34CrossRefPubMed Kim SY, Lee SM, Tak JK et al (2007) Regulation of singlet oxygen-induced apoptosis by cytosolic NADP+-dependent isocitrate dehydrogenase. Mol Cell Biochem 302:27–34CrossRefPubMed
14.
go back to reference Koehler A, Van Noorden CJF (2003) Reduced nicotinamide adenine dinucleotide phosphate and the higher incidence of pollution-induced liver cancer in female flounder. Environ Toxicol Chem 22:2703–2710CrossRefPubMed Koehler A, Van Noorden CJF (2003) Reduced nicotinamide adenine dinucleotide phosphate and the higher incidence of pollution-induced liver cancer in female flounder. Environ Toxicol Chem 22:2703–2710CrossRefPubMed
15.
go back to reference Koshland DE Jr, Walsh K, LaPorte DC (1985) Sensitivity of metabolic fluxes to covalent control. Curr Top Cell Regul 27:13–22PubMed Koshland DE Jr, Walsh K, LaPorte DC (1985) Sensitivity of metabolic fluxes to covalent control. Curr Top Cell Regul 27:13–22PubMed
16.
go back to reference Lee SM, Park SY, Shin SW et al (2009) Silencing of cytosolic NADP(+)-dependent isocitrate dehydrogenase by small interfering RNA enhances the sensitivity of HeLa cells toward staurosporine. Free Radic Res 43:165–173CrossRefPubMed Lee SM, Park SY, Shin SW et al (2009) Silencing of cytosolic NADP(+)-dependent isocitrate dehydrogenase by small interfering RNA enhances the sensitivity of HeLa cells toward staurosporine. Free Radic Res 43:165–173CrossRefPubMed
17.
go back to reference Mardis ER, Ding L, Doolong DJ et al (2009) Recurring mutations found by sequencing an acute myeloid leukemia genome. N Engl J Med 361:1058–1066CrossRefPubMed Mardis ER, Ding L, Doolong DJ et al (2009) Recurring mutations found by sequencing an acute myeloid leukemia genome. N Engl J Med 361:1058–1066CrossRefPubMed
18.
go back to reference Margittai E, Banhegyi G (2008) Isocitrate dehydrogenase: a NADPH-generating enzyme in the lumen of the endoplasmic reticulum. Arch Biochem Biophys 471:184–190CrossRefPubMed Margittai E, Banhegyi G (2008) Isocitrate dehydrogenase: a NADPH-generating enzyme in the lumen of the endoplasmic reticulum. Arch Biochem Biophys 471:184–190CrossRefPubMed
19.
go back to reference Nobusawa S, Watanabe T, Kleihues P et al (2009) IDH1 mutations as molecular signature and predictive factor of secondary glioblastomas. Clin Cancer Res 15:6002–6007CrossRefPubMed Nobusawa S, Watanabe T, Kleihues P et al (2009) IDH1 mutations as molecular signature and predictive factor of secondary glioblastomas. Clin Cancer Res 15:6002–6007CrossRefPubMed
20.
go back to reference Ozben T (2007) Oxidative stress and apoptosis: impact on cancer therapy. J Pharm Sci 96:2181–2196CrossRefPubMed Ozben T (2007) Oxidative stress and apoptosis: impact on cancer therapy. J Pharm Sci 96:2181–2196CrossRefPubMed
21.
go back to reference Parsons DW, Jones S, Zhang X et al (2008) An integrated genomic analysis of human glioblastoma multiforme. Science 321:1807–1812CrossRefPubMed Parsons DW, Jones S, Zhang X et al (2008) An integrated genomic analysis of human glioblastoma multiforme. Science 321:1807–1812CrossRefPubMed
22.
24.
go back to reference Sanson M, Marie Y, Paris S et al (2009) Isocitrate dehydrogenase 1 codon 132 mutation is an important prognostic biomarker in gliomas. J Clin Oncol 27:4150–4154CrossRefPubMed Sanson M, Marie Y, Paris S et al (2009) Isocitrate dehydrogenase 1 codon 132 mutation is an important prognostic biomarker in gliomas. J Clin Oncol 27:4150–4154CrossRefPubMed
25.
go back to reference Sonoda Y, Kumabe T, Nakamura T et al (2009) Analysis of IDH1 and IDH2 mutations in Japanese glioma patients. Cancer Sci 100:1996–1998CrossRefPubMed Sonoda Y, Kumabe T, Nakamura T et al (2009) Analysis of IDH1 and IDH2 mutations in Japanese glioma patients. Cancer Sci 100:1996–1998CrossRefPubMed
26.
go back to reference Stoward P, Van Noorden CJF (1991) Histochemical methods for dehydrogenases. Churchill–Livingstone, Edinburgh Stoward P, Van Noorden CJF (1991) Histochemical methods for dehydrogenases. Churchill–Livingstone, Edinburgh
27.
28.
go back to reference Van Noorden CJF, Butcher RG (1991) Quantitative enzyme histochemistry. Churchill–Livingstone, Edinburgh Van Noorden CJF, Butcher RG (1991) Quantitative enzyme histochemistry. Churchill–Livingstone, Edinburgh
29.
go back to reference Van Noorden CJF, Frederiks WM (1992) Enzyme histochemistry. A laboratory manual of current methods. Oxford Science Publications, Oxford Van Noorden CJF, Frederiks WM (1992) Enzyme histochemistry. A laboratory manual of current methods. Oxford Science Publications, Oxford
30.
go back to reference Van Noorden CJF (2009) Metabolic mapping by enzyme histochemistry in living animals, tissues and cells. J Physiol Pharmacol 60(Suppl 4):125–129PubMed Van Noorden CJF (2009) Metabolic mapping by enzyme histochemistry in living animals, tissues and cells. J Physiol Pharmacol 60(Suppl 4):125–129PubMed
32.
go back to reference Watanabe T, Nobusawa S, Kleihues P et al (2009) IDH1 mutations are early events in the development of astrocytomas and oligodendrogliomas. Am J Pathol 174:1149–1153CrossRefPubMed Watanabe T, Nobusawa S, Kleihues P et al (2009) IDH1 mutations are early events in the development of astrocytomas and oligodendrogliomas. Am J Pathol 174:1149–1153CrossRefPubMed
33.
go back to reference Watanabe T, Vital A, Nobusawa S et al (2009) Selective acquisition of IDH1 R132C mutations in astrocytomas associated with Li-Fraumeni syndrome. Acta Neuropathol 117:653–656CrossRefPubMed Watanabe T, Vital A, Nobusawa S et al (2009) Selective acquisition of IDH1 R132C mutations in astrocytomas associated with Li-Fraumeni syndrome. Acta Neuropathol 117:653–656CrossRefPubMed
34.
go back to reference Weller M, Felsberg J, Hartmann C et al (2009) Molecular predictors of progression-free and overall survival in patients with newly diagnosed glioblastoma: a prospective translational study of the German glioma network. J Clin Oncol 27:5743–5750CrossRefPubMed Weller M, Felsberg J, Hartmann C et al (2009) Molecular predictors of progression-free and overall survival in patients with newly diagnosed glioblastoma: a prospective translational study of the German glioma network. J Clin Oncol 27:5743–5750CrossRefPubMed
35.
go back to reference Xu X, Zhao J, Xu Z et al (2004) Structures of human cytosolic NADP-dependent isocitrate dehydrogenase reveal a novel self-regulatory mechanism of activity. J Biol Chem 279:33946–33957CrossRefPubMed Xu X, Zhao J, Xu Z et al (2004) Structures of human cytosolic NADP-dependent isocitrate dehydrogenase reveal a novel self-regulatory mechanism of activity. J Biol Chem 279:33946–33957CrossRefPubMed
36.
go back to reference Yan H, Parsons DW, Jin G et al (2009) IDH1 and IDH2 mutations in gliomas. N Engl J Med 360:765–773CrossRefPubMed Yan H, Parsons DW, Jin G et al (2009) IDH1 and IDH2 mutations in gliomas. N Engl J Med 360:765–773CrossRefPubMed
37.
go back to reference Ying W (2008) NAD+/NADH and NADP+/NADPH in cellular functions and cell death: regulation and biological consequences. Antioxid Redox Signal 10:179–206CrossRefPubMed Ying W (2008) NAD+/NADH and NADP+/NADPH in cellular functions and cell death: regulation and biological consequences. Antioxid Redox Signal 10:179–206CrossRefPubMed
38.
go back to reference Zhao S, Lin Y, Xu W et al (2009) Glioma-derived mutations in IDH1 dominantly inhibit IDH1 catalytic activity and induce HIF-1alpha. Science 324:261–265CrossRefPubMed Zhao S, Lin Y, Xu W et al (2009) Glioma-derived mutations in IDH1 dominantly inhibit IDH1 catalytic activity and induce HIF-1alpha. Science 324:261–265CrossRefPubMed
Metadata
Title
The prognostic IDH1 R132 mutation is associated with reduced NADP+-dependent IDH activity in glioblastoma
Authors
Fonnet E. Bleeker
Nadia A. Atai
Simona Lamba
Ard Jonker
Denise Rijkeboer
Klazien S. Bosch
Wikky Tigchelaar
Dirk Troost
W. Peter Vandertop
Alberto Bardelli
Cornelis J. F. Van Noorden
Publication date
01-04-2010
Publisher
Springer-Verlag
Published in
Acta Neuropathologica / Issue 4/2010
Print ISSN: 0001-6322
Electronic ISSN: 1432-0533
DOI
https://doi.org/10.1007/s00401-010-0645-6

Other articles of this Issue 4/2010

Acta Neuropathologica 4/2010 Go to the issue