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Published in: Tumor Biology 5/2013

01-10-2013 | Research Article

Polymorphisms of DNA repair genes XPD, XRCC1, and OGG1, and lung adenocarcinoma susceptibility in Chinese population

Authors: Fang-dan Ouyang, Fu-lan Yang, Han-chun Chen, Md. Asaduzzaman Khan, Feng-mao Huang, Xin-xing Wan, Ai-hua Xu, Xing Huang, Mei-juan Zhou, Qian Fang, Dian-zheng Zhang

Published in: Tumor Biology | Issue 5/2013

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Abstract

Lung adenocarcinoma (ADC) is one of the major histological types of lung cancer. Genetic polymorphism in DNA repair genes and lung ADC susceptibility is well documented. In this case–control study, the association between the polymorphic sites of DNA repair genes XPD-751, XRCC1-399, and OGG1-326, and lung ADC susceptibility in ethnic Han Chinese population has been investigated. Genomic DNA was isolated from the peripheral blood of 201 healthy controls and 82 lung ADC patients from the people of Hunan Province, China. Polymorphisms of the investigated genes were analyzed by using polymerase chain reaction–restriction fragment length polymorphism. There was no significant difference between the samples from lung ADC patients and healthy controls about the genotype frequencies of XPD-751, XRCC1-399, and OGG1-326 sites. However, multifactor dimensionality reduction analysis showed that the genetic polymorphisms of the three-loci models of DNA repair genes (XPD-751/XRCC1-399/OGG1-326) are associated with lung ADC. Thus, this study reveals that a three-order interaction among the polymorphic sites of XPD-751, XRCC1-399, and OGG1-326 is associated with lung ADC risk in the studied population, although polymorphism in individual gene was not associated.
Literature
1.
go back to reference Jemal A, Bray F, Center MM, Ferlay J, Ward E, Forman D. Global cancer statistics. CA Cancer J Clin. 2011;61:69–90.CrossRefPubMed Jemal A, Bray F, Center MM, Ferlay J, Ward E, Forman D. Global cancer statistics. CA Cancer J Clin. 2011;61:69–90.CrossRefPubMed
2.
go back to reference Travis W, Nicholson S, Hirsch FR, et al. Tumors of the lung. In: Travis D, Brambilla E, Muller-Hermelink HK, Harris CC, editors. World Health Organization classification of tumors: pathology and genetics, tumours of lung, pleura, thymus and heart. Lyon: IARC; 2004. p. 31–4. Travis W, Nicholson S, Hirsch FR, et al. Tumors of the lung. In: Travis D, Brambilla E, Muller-Hermelink HK, Harris CC, editors. World Health Organization classification of tumors: pathology and genetics, tumours of lung, pleura, thymus and heart. Lyon: IARC; 2004. p. 31–4.
3.
go back to reference Oliveira C, Seruca R, Carneiro F. Genetics, pathology, and clinics of familial gastric cancer. Int J Surg Pathol. 2006;14:21–33.CrossRefPubMed Oliveira C, Seruca R, Carneiro F. Genetics, pathology, and clinics of familial gastric cancer. Int J Surg Pathol. 2006;14:21–33.CrossRefPubMed
4.
go back to reference Maynard S, Schurman SH, Harboe C, de Souza-Pinto NC, Bohr VA. Base excision repair of oxidative DNA damage and association with cancer and aging. Carcinogenesis. 2009;30:2–10.PubMedCentralCrossRefPubMed Maynard S, Schurman SH, Harboe C, de Souza-Pinto NC, Bohr VA. Base excision repair of oxidative DNA damage and association with cancer and aging. Carcinogenesis. 2009;30:2–10.PubMedCentralCrossRefPubMed
5.
go back to reference Shen H, Spitz MR, Qiao Y, et al. Smoking, DNA repair capacity and risk of non-small cell lung cancer. Int J Cancer. 2003;107:84–8.CrossRefPubMed Shen H, Spitz MR, Qiao Y, et al. Smoking, DNA repair capacity and risk of non-small cell lung cancer. Int J Cancer. 2003;107:84–8.CrossRefPubMed
6.
go back to reference Dai L, Duan F, Wang P, Song C, Wang K, Zhang J. XRCC1 gene polymorphisms and lung cancer susceptibility: a meta-analysis of 44 case–control studies. Mol Biol Rep. 2012;39:9535–47.CrossRefPubMed Dai L, Duan F, Wang P, Song C, Wang K, Zhang J. XRCC1 gene polymorphisms and lung cancer susceptibility: a meta-analysis of 44 case–control studies. Mol Biol Rep. 2012;39:9535–47.CrossRefPubMed
7.
go back to reference Kazma R, Babron MC, Gaborieau V, et al. Lung cancer and DNA repair genes: multilevel association analysis from the International Lung Cancer Consortium. Carcinogenesis. 2012;33:1059–64.PubMedCentralCrossRefPubMed Kazma R, Babron MC, Gaborieau V, et al. Lung cancer and DNA repair genes: multilevel association analysis from the International Lung Cancer Consortium. Carcinogenesis. 2012;33:1059–64.PubMedCentralCrossRefPubMed
9.
go back to reference Xi T, Jones IM, Mohrenweiser HW. Many amino acid substitution variants identified in DNA repair genes during human population screenings are predicted to impact protein function. Genomics. 2004;83:970–9.CrossRefPubMed Xi T, Jones IM, Mohrenweiser HW. Many amino acid substitution variants identified in DNA repair genes during human population screenings are predicted to impact protein function. Genomics. 2004;83:970–9.CrossRefPubMed
10.
go back to reference Coin F, Marinoni JC, Rodolfo C, Fribourg S, Pedrini AM, Egly JM. Mutations in the XPD helicase gene result in XP and TTD phenotypes, preventing interaction between XPD and the p44 subunit of TFIIH. Nat Genet. 1998;20:184–8.CrossRefPubMed Coin F, Marinoni JC, Rodolfo C, Fribourg S, Pedrini AM, Egly JM. Mutations in the XPD helicase gene result in XP and TTD phenotypes, preventing interaction between XPD and the p44 subunit of TFIIH. Nat Genet. 1998;20:184–8.CrossRefPubMed
11.
go back to reference Hemminki K, Xu G, Angelini S, et al. XPD exon 10 and 23 poly-morphisms and DNA repair in human skin in situ. Carcinogenesis. 2001;22:1185–8.CrossRefPubMed Hemminki K, Xu G, Angelini S, et al. XPD exon 10 and 23 poly-morphisms and DNA repair in human skin in situ. Carcinogenesis. 2001;22:1185–8.CrossRefPubMed
12.
go back to reference Thompson LH, West MG. XRRC1 keeps DNA from getting stranded. Mutat Res. 2000;59:1–18.CrossRef Thompson LH, West MG. XRRC1 keeps DNA from getting stranded. Mutat Res. 2000;59:1–18.CrossRef
13.
go back to reference Hung RJ, Hall J, Brennan P, Boffetta P. Genetic polymorphisms in the base excision repair pathway and cancer risk: a HuGE review. Am J Epidemiol. 2005;162:925–42.CrossRefPubMed Hung RJ, Hall J, Brennan P, Boffetta P. Genetic polymorphisms in the base excision repair pathway and cancer risk: a HuGE review. Am J Epidemiol. 2005;162:925–42.CrossRefPubMed
14.
go back to reference Shinmura K, Yokota J. The OGG1 gene encodes a repair enzyme for oxidatively damaged DNA and is involved in human carcinogenesis. Antioxid Redox Signal. 2001;3:597–609.CrossRefPubMed Shinmura K, Yokota J. The OGG1 gene encodes a repair enzyme for oxidatively damaged DNA and is involved in human carcinogenesis. Antioxid Redox Signal. 2001;3:597–609.CrossRefPubMed
15.
go back to reference Kohno T, Shinmura K, Tosaka M, et al. Genetic polymorphisms and alternative splicing of the hOGG1 gene, that is involved in the repair of 8-hydroxyguanine in damaged DNA. Oncogene. 1998;16:3219–25.CrossRefPubMed Kohno T, Shinmura K, Tosaka M, et al. Genetic polymorphisms and alternative splicing of the hOGG1 gene, that is involved in the repair of 8-hydroxyguanine in damaged DNA. Oncogene. 1998;16:3219–25.CrossRefPubMed
17.
go back to reference Kim JI, Park YJ, Kim KH, et al. hOGG1 Ser326Cys polymorphism modifies the significance of the environmental risk factor for colon cancer. World J Gastroenterol. 2003;9:956–60.PubMed Kim JI, Park YJ, Kim KH, et al. hOGG1 Ser326Cys polymorphism modifies the significance of the environmental risk factor for colon cancer. World J Gastroenterol. 2003;9:956–60.PubMed
18.
go back to reference Davis LG, Dibner MD, Battey JF. Preparation of DNA from eukaryotic cells. In: Basic methods in molecular biology. New York: Elsevier; 1986. p. 42–50. Davis LG, Dibner MD, Battey JF. Preparation of DNA from eukaryotic cells. In: Basic methods in molecular biology. New York: Elsevier; 1986. p. 42–50.
19.
go back to reference Li Z, Guan W, Li MX, et al. Genetic polymorphism of DNA base-excision repair genes (APE1, OGG1 and XRCC1) and their correlation with risk of lung cancer in a Chinese population. Arch Med Res. 2011;42:226–34.CrossRefPubMed Li Z, Guan W, Li MX, et al. Genetic polymorphism of DNA base-excision repair genes (APE1, OGG1 and XRCC1) and their correlation with risk of lung cancer in a Chinese population. Arch Med Res. 2011;42:226–34.CrossRefPubMed
20.
go back to reference Khan MA, Tania M, Zhang DZ, Chen HC. Antioxidant enzymes and cancer. Chin J Cancer Res. 2010;22:87–92.CrossRef Khan MA, Tania M, Zhang DZ, Chen HC. Antioxidant enzymes and cancer. Chin J Cancer Res. 2010;22:87–92.CrossRef
21.
go back to reference Mohrenweiser HW, Jones IM. Variation in DNA repair is a factor in cancer susceptibility: a paradigm for promises and perils of individual and population risk estimation? Mutat Res. 1998;400:15–24.CrossRefPubMed Mohrenweiser HW, Jones IM. Variation in DNA repair is a factor in cancer susceptibility: a paradigm for promises and perils of individual and population risk estimation? Mutat Res. 1998;400:15–24.CrossRefPubMed
22.
go back to reference Xing DY, Qi J, Tan W, et al. Association of genetic polymorphisms in the DNA repair gene XPD with risk of lung and esophageal cancer in a Chinese population in Beijing. Chin J Med Genet. 2003;20:35–8. Xing DY, Qi J, Tan W, et al. Association of genetic polymorphisms in the DNA repair gene XPD with risk of lung and esophageal cancer in a Chinese population in Beijing. Chin J Med Genet. 2003;20:35–8.
23.
go back to reference Hou SM, Fält S, Angelini S, et al. The XPD variant alleles are associated with increased aromatic DNA adduct level and lung cancer risk. Carcinogenesis. 2002;23:599–603.CrossRefPubMed Hou SM, Fält S, Angelini S, et al. The XPD variant alleles are associated with increased aromatic DNA adduct level and lung cancer risk. Carcinogenesis. 2002;23:599–603.CrossRefPubMed
24.
go back to reference Vogel U, Laros I, Jacobsen NR, et al. Two regions in chromosome 19q13.2-3 are associated with risk of lung cancer. Mutat Res. 2004;546:65–74.CrossRefPubMed Vogel U, Laros I, Jacobsen NR, et al. Two regions in chromosome 19q13.2-3 are associated with risk of lung cancer. Mutat Res. 2004;546:65–74.CrossRefPubMed
25.
go back to reference Divine KK, Gilliland FD, Crowell RE, et al. The XRCC1399glutamine allele is a risk factor for adenocarcinoma of the lung. Mutat Res. 2001;461:273–8.CrossRefPubMed Divine KK, Gilliland FD, Crowell RE, et al. The XRCC1399glutamine allele is a risk factor for adenocarcinoma of the lung. Mutat Res. 2001;461:273–8.CrossRefPubMed
26.
go back to reference Li MC, Cui ZS, He QC, Zhou BS. Association of genetic polymorphism in the DNA repair gene XRCC1 with susceptibility to lung cancer in non-smoking women. Zhonghua Zhong Liu Za Zhi. 2005;27:713–6.PubMed Li MC, Cui ZS, He QC, Zhou BS. Association of genetic polymorphism in the DNA repair gene XRCC1 with susceptibility to lung cancer in non-smoking women. Zhonghua Zhong Liu Za Zhi. 2005;27:713–6.PubMed
27.
go back to reference Yin J, Vogel U, Ma Y, Qi R, Sun Z, Wang H. The DNA repair gene XRCC1 and genetic susceptibility of lung cancer in a northeastern Chinese population. Lung Cancer. 2007;56:153–60.CrossRefPubMed Yin J, Vogel U, Ma Y, Qi R, Sun Z, Wang H. The DNA repair gene XRCC1 and genetic susceptibility of lung cancer in a northeastern Chinese population. Lung Cancer. 2007;56:153–60.CrossRefPubMed
28.
go back to reference Zhang X, Miao X, Liang G, et al. Polymorphisms in DNA base excision repair genes ADPRT and XRCC1 and risk of lung cancer. Cancer Res. 2005;65:722–6.PubMed Zhang X, Miao X, Liang G, et al. Polymorphisms in DNA base excision repair genes ADPRT and XRCC1 and risk of lung cancer. Cancer Res. 2005;65:722–6.PubMed
29.
go back to reference Sugimura H, Kohno T, Wakai K, et al. hOGG1 Ser326Cys polymorphism and lung cancer susceptibility. Cancer Epidemiol Biomarkers Prev. 1999;8:669–74.PubMed Sugimura H, Kohno T, Wakai K, et al. hOGG1 Ser326Cys polymorphism and lung cancer susceptibility. Cancer Epidemiol Biomarkers Prev. 1999;8:669–74.PubMed
30.
go back to reference Ito H, Hamajima N, Takezaki T, et al. A limited association of OGG1 Ser326Cys polymorphism for adenocarcinoma of the lung. J Epidemiol. 2002;12:258–65.CrossRefPubMed Ito H, Hamajima N, Takezaki T, et al. A limited association of OGG1 Ser326Cys polymorphism for adenocarcinoma of the lung. J Epidemiol. 2002;12:258–65.CrossRefPubMed
31.
go back to reference Kohno T, Kunitoh H, Toyama K, et al. Association of the OGG1-Ser326Cys polymorphism with lung adenocarcinoma risk. Cancer Sci. 2006;97:724–8.CrossRefPubMed Kohno T, Kunitoh H, Toyama K, et al. Association of the OGG1-Ser326Cys polymorphism with lung adenocarcinoma risk. Cancer Sci. 2006;97:724–8.CrossRefPubMed
32.
go back to reference Park J, Chen L, Tockman MS, Elahi A, Lazarus P. The human 8-oxoguanine DNA N-glycosylase 1 (hOGG1) DNA repair enzyme and its association with lung cancer risk. Pharmacogenetics. 2004;14:103–9.CrossRefPubMed Park J, Chen L, Tockman MS, Elahi A, Lazarus P. The human 8-oxoguanine DNA N-glycosylase 1 (hOGG1) DNA repair enzyme and its association with lung cancer risk. Pharmacogenetics. 2004;14:103–9.CrossRefPubMed
33.
go back to reference López-Cima MF, González-Arriaga P, García-Castro L, et al. Polymorphisms in XPC, XPD, XRCC1, and XRCC3 DNA repair genes and lung cancer risk in a population of northern Spain. BMC Cancer. 2007;7:162.CrossRefPubMed López-Cima MF, González-Arriaga P, García-Castro L, et al. Polymorphisms in XPC, XPD, XRCC1, and XRCC3 DNA repair genes and lung cancer risk in a population of northern Spain. BMC Cancer. 2007;7:162.CrossRefPubMed
34.
go back to reference Palli D, Polidoro S, D’Errico M, et al. Polymorphic DNA repair and metabolic genes: a multigenic study on gastric cancer. Mutagenesis. 2010;25:569–75.CrossRefPubMed Palli D, Polidoro S, D’Errico M, et al. Polymorphic DNA repair and metabolic genes: a multigenic study on gastric cancer. Mutagenesis. 2010;25:569–75.CrossRefPubMed
35.
go back to reference Zhang Y, Zhang L, Song Z, et al. Genetic polymorphisms in DNA repair genes OGG1, APE1, XRCC1, and XPD and the risk of age-related cataract. Ophthalmology. 2012;119:900–6.CrossRefPubMed Zhang Y, Zhang L, Song Z, et al. Genetic polymorphisms in DNA repair genes OGG1, APE1, XRCC1, and XPD and the risk of age-related cataract. Ophthalmology. 2012;119:900–6.CrossRefPubMed
Metadata
Title
Polymorphisms of DNA repair genes XPD, XRCC1, and OGG1, and lung adenocarcinoma susceptibility in Chinese population
Authors
Fang-dan Ouyang
Fu-lan Yang
Han-chun Chen
Md. Asaduzzaman Khan
Feng-mao Huang
Xin-xing Wan
Ai-hua Xu
Xing Huang
Mei-juan Zhou
Qian Fang
Dian-zheng Zhang
Publication date
01-10-2013
Publisher
Springer Netherlands
Published in
Tumor Biology / Issue 5/2013
Print ISSN: 1010-4283
Electronic ISSN: 1423-0380
DOI
https://doi.org/10.1007/s13277-013-0844-6

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