Skip to main content
Top
Published in: Journal of Digital Imaging 6/2012

01-12-2012

Interactive Visualization and Analysis of Multimodal Datasets for Surgical Applications

Authors: Can Kirmizibayrak, Yeny Yim, Mike Wakid, James Hahn

Published in: Journal of Imaging Informatics in Medicine | Issue 6/2012

Login to get access

Abstract

Surgeons use information from multiple sources when making surgical decisions. These include volumetric datasets (such as CT, PET, MRI, and their variants), 2D datasets (such as endoscopic videos), and vector-valued datasets (such as computer simulations). Presenting all the information to the user in an effective manner is a challenging problem. In this paper, we present a visualization approach that displays the information from various sources in a single coherent view. The system allows the user to explore and manipulate volumetric datasets, display analysis of dataset values in local regions, combine 2D and 3D imaging modalities and display results of vector-based computer simulations. Several interaction methods are discussed: in addition to traditional interfaces including mouse and trackers, gesture-based natural interaction methods are shown to control these visualizations with real-time performance. An example of a medical application (medialization laryngoplasty) is presented to demonstrate how the combination of different modalities can be used in a surgical setting with our approach.
Literature
1.
go back to reference Correa CD: Visualizing what lies inside. SIGGRAPH Comput Graph 43(2):1–6, 2009CrossRef Correa CD: Visualizing what lies inside. SIGGRAPH Comput Graph 43(2):1–6, 2009CrossRef
2.
go back to reference Luo H, Mittal R, Zheng X, Bielamowicz S, Walsh R, Hahn J: An immersed-boundary method for flow–structure interaction in biological systems with application to phonation. J Comput Phys 227(22):9303–9332, 2008PubMedCrossRef Luo H, Mittal R, Zheng X, Bielamowicz S, Walsh R, Hahn J: An immersed-boundary method for flow–structure interaction in biological systems with application to phonation. J Comput Phys 227(22):9303–9332, 2008PubMedCrossRef
3.
go back to reference Perrin DP, Vasilyev NV, Novotny P, Stoll J, Howe RD, Dupont PE, et al: Image guided surgical interventions. Curr Probl Surg 46(9):730–766, 2009PubMedCrossRef Perrin DP, Vasilyev NV, Novotny P, Stoll J, Howe RD, Dupont PE, et al: Image guided surgical interventions. Curr Probl Surg 46(9):730–766, 2009PubMedCrossRef
4.
go back to reference Peters TM, Cleary K: Image-guided interventions: technology and applications. Springer, New York, 2008CrossRef Peters TM, Cleary K: Image-guided interventions: technology and applications. Springer, New York, 2008CrossRef
5.
go back to reference Peters TM: Image-guidance for surgical procedures. Phys Med Biol 14:R505, 2006CrossRef Peters TM: Image-guidance for surgical procedures. Phys Med Biol 14:R505, 2006CrossRef
6.
go back to reference Kruger J, Schneider J, Westermann R: ClearView: an interactive context preserving hotspot visualization technique. IEEE Trans Visual Comput Graph 12(5):941–948, 2006CrossRef Kruger J, Schneider J, Westermann R: ClearView: an interactive context preserving hotspot visualization technique. IEEE Trans Visual Comput Graph 12(5):941–948, 2006CrossRef
7.
go back to reference Svakhine N, Ebert DS, Stredney D: Illustration motifs for effective medical volume illustration. IEEE Comput Graph Appl 25(3):31–39, 2005PubMedCrossRef Svakhine N, Ebert DS, Stredney D: Illustration motifs for effective medical volume illustration. IEEE Comput Graph Appl 25(3):31–39, 2005PubMedCrossRef
8.
go back to reference Bier EA, Stone MC, Pier K, Buxton W and DeRose TD: Toolglass and magic lenses: The see-through interface. In: Proceedings of the 20th annual conference on Computer graphics and interactive techniques, Anaheim, CA, 1993, pp 73–80 Bier EA, Stone MC, Pier K, Buxton W and DeRose TD: Toolglass and magic lenses: The see-through interface. In: Proceedings of the 20th annual conference on Computer graphics and interactive techniques, Anaheim, CA, 1993, pp 73–80
9.
go back to reference Wang L, Zhao Y, Mueller K and Kaufman A: The magic volume lens: an interactive focus+context technique for volume rendering. pp 367–374 Wang L, Zhao Y, Mueller K and Kaufman A: The magic volume lens: an interactive focus+context technique for volume rendering. pp 367–374
10.
go back to reference Viega J, Conway MJ, Williams G and Pausch R: 3D magic lenses. In: Proceedings of the 9th annual ACM symposium on User interface software and technology, Seattle, Washington, United States, 1996 Viega J, Conway MJ, Williams G and Pausch R: 3D magic lenses. In: Proceedings of the 9th annual ACM symposium on User interface software and technology, Seattle, Washington, United States, 1996
11.
go back to reference Bruckner S and Gröller ME: VolumeShop: an interactive system for direct volume illustration. In: IEEE Visualization, 2005, pp 671–678 Bruckner S and Gröller ME: VolumeShop: an interactive system for direct volume illustration. In: IEEE Visualization, 2005, pp 671–678
12.
go back to reference Burger K, Kruger J, Westermann R: Direct Volume Editing. IEEE Trans Visual Comput Graph 14(6):1388–1395, 2008CrossRef Burger K, Kruger J, Westermann R: Direct Volume Editing. IEEE Trans Visual Comput Graph 14(6):1388–1395, 2008CrossRef
13.
go back to reference Kirmizibayrak C: Interactive volume visualization and editing methods for surgical applications. Ph.D. Dissertation, Department of Computer Science, The George Washington University, Washington, DC, 2011 Kirmizibayrak C: Interactive volume visualization and editing methods for surgical applications. Ph.D. Dissertation, Department of Computer Science, The George Washington University, Washington, DC, 2011
14.
go back to reference Zhang Z: Iterative point matching for registration of free-form curves and surfaces. Int J Comput Vision 13(2):119–152, 1994CrossRef Zhang Z: Iterative point matching for registration of free-form curves and surfaces. Int J Comput Vision 13(2):119–152, 1994CrossRef
15.
go back to reference Gerasimov P, Fernando R and Green S: Shader Model 3.0: using vertex textures, white paper DA-01373-001_v00, NVIDIA, 2004 Gerasimov P, Fernando R and Green S: Shader Model 3.0: using vertex textures, white paper DA-01373-001_v00, NVIDIA, 2004
16.
go back to reference Scheuermann T and Hensley: Efficient histogram generation using scattering on GPUs. In: Proceedings of the 2007 symposium on Interactive 3D graphics and games, Seattle, Washington, 2007, pp 33–37 Scheuermann T and Hensley: Efficient histogram generation using scattering on GPUs. In: Proceedings of the 2007 symposium on Interactive 3D graphics and games, Seattle, Washington, 2007, pp 33–37
17.
go back to reference Li W, Fan Z, Wei X and Kaufman A: GPU-Based flow simulation with complex boundaries. GPU Gems II, 2003 Li W, Fan Z, Wei X and Kaufman A: GPU-Based flow simulation with complex boundaries. GPU Gems II, 2003
18.
go back to reference Yim Y, Wakid M, Kirmizibayrak C, Bielamowicz S and Hahn JK: Registration of 3D CT data to 2D endoscopic image using a gradient mutual information based viewpoint matching for image-guided Medialization Laryngoplasty, JCSE 4(4):368–387, 2010 Yim Y, Wakid M, Kirmizibayrak C, Bielamowicz S and Hahn JK: Registration of 3D CT data to 2D endoscopic image using a gradient mutual information based viewpoint matching for image-guided Medialization Laryngoplasty, JCSE 4(4):368–387, 2010
19.
go back to reference Studholme C, Hill DLG, Hawkes DJ: An overlap invariant entropy measure of 3D medical image alignment. Pattern Recogn 32(1):71–86, 1999CrossRef Studholme C, Hill DLG, Hawkes DJ: An overlap invariant entropy measure of 3D medical image alignment. Pattern Recogn 32(1):71–86, 1999CrossRef
20.
go back to reference Johnson R, O’Hara K, Sellen A, Cousins C and Criminisi A: Exploring the potential for touchless interaction in image-guided interventional radiology. In: Proceedings of the 2011 annual conference on Human factors in computing systems, Vancouver, BC, Canada, 2011, pp 3323–3332 Johnson R, O’Hara K, Sellen A, Cousins C and Criminisi A: Exploring the potential for touchless interaction in image-guided interventional radiology. In: Proceedings of the 2011 annual conference on Human factors in computing systems, Vancouver, BC, Canada, 2011, pp 3323–3332
21.
go back to reference Kirmizibayrak C, Radeva N, Wakid M, Philbeck J, Sibert J and Hahn J: Evaluation of gesture based interfaces for medical volume visualization tasks. In: Proceedings of the 10th International Conference on Virtual Reality Continuum and Its Applications in Industry, Hong Kong, China, 2011, pp 69–74 Kirmizibayrak C, Radeva N, Wakid M, Philbeck J, Sibert J and Hahn J: Evaluation of gesture based interfaces for medical volume visualization tasks. In: Proceedings of the 10th International Conference on Virtual Reality Continuum and Its Applications in Industry, Hong Kong, China, 2011, pp 69–74
22.
go back to reference Helferty JP, Sherbondy AJ, Kiraly AP, Higgins WE: Computer-based system for the virtual-endoscopic guidance of bronchoscopy. Comp Vis Image Understand 108(1–2):171–187, 2007CrossRef Helferty JP, Sherbondy AJ, Kiraly AP, Higgins WE: Computer-based system for the virtual-endoscopic guidance of bronchoscopy. Comp Vis Image Understand 108(1–2):171–187, 2007CrossRef
24.
go back to reference Jin G, Baek N, Hahn JK, Bielamowicz S, Mittal R, Walsh R: Image guided medialization laryngoplasty. Computer Animation and Virtual Worlds 20(1):67–77, 2009PubMedCrossRef Jin G, Baek N, Hahn JK, Bielamowicz S, Mittal R, Walsh R: Image guided medialization laryngoplasty. Computer Animation and Virtual Worlds 20(1):67–77, 2009PubMedCrossRef
25.
go back to reference Bielamowicz S: Perspectives on medialization laryngoplasty. Otolaryngolog Clin North America 37(1):139, 2004CrossRef Bielamowicz S: Perspectives on medialization laryngoplasty. Otolaryngolog Clin North America 37(1):139, 2004CrossRef
26.
go back to reference Luo H, Mittal R and Bielamowicz SA: Analysis of flow-structure interaction in the larynx during phonation using an immersed-boundary method. J Acoust Soc Am vol. 126:no. 2, 2009 Luo H, Mittal R and Bielamowicz SA: Analysis of flow-structure interaction in the larynx during phonation using an immersed-boundary method. J Acoust Soc Am vol. 126:no. 2, 2009
Metadata
Title
Interactive Visualization and Analysis of Multimodal Datasets for Surgical Applications
Authors
Can Kirmizibayrak
Yeny Yim
Mike Wakid
James Hahn
Publication date
01-12-2012
Publisher
Springer-Verlag
Published in
Journal of Imaging Informatics in Medicine / Issue 6/2012
Print ISSN: 2948-2925
Electronic ISSN: 2948-2933
DOI
https://doi.org/10.1007/s10278-012-9461-y

Other articles of this Issue 6/2012

Journal of Digital Imaging 6/2012 Go to the issue