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Published in: Acta Neurochirurgica 4/2015

01-04-2015 | Clinical Article - Brain Injury

Higher impact energy in traumatic brain injury interferes with noncovalent and covalent bonds resulting in cytotoxic brain tissue edema as measured with computational simulation

Authors: Hans von Holst, Xiaogai Li

Published in: Acta Neurochirurgica | Issue 4/2015

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Abstract

Background

Cytotoxic brain tissue edema is a complicated secondary consequence of ischemic injury following cerebral diseases such as traumatic brain injury and stroke. To some extent the pathophysiological mechanisms are known, but far from completely. In this study, a hypothesis is proposed in which protein unfolding and perturbation of nucleotide structures participate in the development of cytotoxic edema following traumatic brain injury (TBI).

Methods

An advanced computational simulation model of the human head was used to simulate TBI. The consequences of kinetic energy transfer following an external dynamic impact were analyzed including the intracranial pressure (ICP), strain level, and their potential influences on the noncovalent and covalent bonds in folded protein structures.

Results

The result shows that although most of the transferred kinetic energy is absorbed in the skin and three bone layers, there is a substantial amount of energy reaching the gray and white matter. The kinetic energy from an external dynamic impact has the theoretical potential to interfere not only with noncovalent but also covalent bonds when high enough. The induced mechanical strain and pressure may further interfere with the proteins, which accumulate water molecules into the interior of the hydrophobic structures of unfolded proteins. Simultaneously, the noncovalent energy-rich bonds in nucleotide adenosine-triphosphates may be perturbed as well.

Conclusions

Based on the analysis of the numerical simulation data, the kinetic energy from an external dynamic impact has the theoretical potential to interfere not only with noncovalent, but also with covalent bonds when high enough. The subsequent attraction of increased water molecules into the unfolded protein structures and disruption of adenosine-triphosphate bonds could to some extent explain the etiology to cytotoxic edema.
Literature
2.
go back to reference von Holst H, Li X (2013) Consequences of the dynamic triple peak impact factor in traumatic brain injury as measured with numerical simulation. Front Neurol 4:3 von Holst H, Li X (2013) Consequences of the dynamic triple peak impact factor in traumatic brain injury as measured with numerical simulation. Front Neurol 4:3
3.
go back to reference von Holst H, Li X (2013) The dynamic triple peak impact factor in traumatic brain injury influences native protein structures in gray and white matter as measured with computational simulation. Neurol Res 35:782–789CrossRefPubMed von Holst H, Li X (2013) The dynamic triple peak impact factor in traumatic brain injury influences native protein structures in gray and white matter as measured with computational simulation. Neurol Res 35:782–789CrossRefPubMed
4.
go back to reference von Holst H, Li X (2013) Numerical impact simulation of gradually increased kinetic energy transfer has the potential to break up folded protein structures resulting in cytotoxic brain tissue edema. J Neurotrauma 30:1192–1199CrossRef von Holst H, Li X (2013) Numerical impact simulation of gradually increased kinetic energy transfer has the potential to break up folded protein structures resulting in cytotoxic brain tissue edema. J Neurotrauma 30:1192–1199CrossRef
5.
go back to reference Leckband D (2000) Measuring the forces that control protein interactions. Annu Rev Biophys Biomol Struct 29:1–26CrossRefPubMed Leckband D (2000) Measuring the forces that control protein interactions. Annu Rev Biophys Biomol Struct 29:1–26CrossRefPubMed
6.
go back to reference Jha SK, Udgaonkar JB (2009) Direct evidence for a dry molten globule intermediate during the unfolding of a small protein. Proc Natl Acad Sci 106:12,289–12,294CrossRef Jha SK, Udgaonkar JB (2009) Direct evidence for a dry molten globule intermediate during the unfolding of a small protein. Proc Natl Acad Sci 106:12,289–12,294CrossRef
7.
go back to reference Jha SK, Dhar D, Krishnamoorthy G, Udgaonkar JB (2009) Continuous dissolution of structure during the unfolding of a small protein. Proc Natl Acad Sci 106:11,113–11,118CrossRef Jha SK, Dhar D, Krishnamoorthy G, Udgaonkar JB (2009) Continuous dissolution of structure during the unfolding of a small protein. Proc Natl Acad Sci 106:11,113–11,118CrossRef
8.
go back to reference Bustamante C, Chemla YR, Forde NR, Izhaky D (2004) Mechanical processes in biochemistry. Annu Rev Biochem 73:705–748CrossRefPubMed Bustamante C, Chemla YR, Forde NR, Izhaky D (2004) Mechanical processes in biochemistry. Annu Rev Biochem 73:705–748CrossRefPubMed
9.
go back to reference Williams PM, Fowler SB, Best RB, Toca-Herrera J, Scott KA, Steward A, Clarke J (2003) Hidden complexity in the mechanical properties of titin. Nature 422:446–449CrossRefPubMed Williams PM, Fowler SB, Best RB, Toca-Herrera J, Scott KA, Steward A, Clarke J (2003) Hidden complexity in the mechanical properties of titin. Nature 422:446–449CrossRefPubMed
10.
go back to reference von Holst H, Li X, Kleiven S (2012) Increased strain levels and water content in brain tissue after decompressive craniotomy. Acta Neurochir 154:1583–1593CrossRef von Holst H, Li X, Kleiven S (2012) Increased strain levels and water content in brain tissue after decompressive craniotomy. Acta Neurochir 154:1583–1593CrossRef
11.
go back to reference Li X, von Holst H, Kleiven S (2012) Decompressive craniectomy causes a significant strain increase in axonal fiber tracts. J Clin Neurosci 20:509–513CrossRef Li X, von Holst H, Kleiven S (2012) Decompressive craniectomy causes a significant strain increase in axonal fiber tracts. J Clin Neurosci 20:509–513CrossRef
12.
go back to reference von Holst H, Li X (2013) Quantification of stretching in the ventricular wall and corpus callosum and corticospinal tracts in hydrocephalus before and after ventriculoperitoneal shunt operation. J Appl Math 2013:Article ID 350,359 von Holst H, Li X (2013) Quantification of stretching in the ventricular wall and corpus callosum and corticospinal tracts in hydrocephalus before and after ventriculoperitoneal shunt operation. J Appl Math 2013:Article ID 350,359
13.
go back to reference Kleiven S (2002) Finite element modeling of the human head. PhD thesis, Royal Institute of Technology (KTH) Kleiven S (2002) Finite element modeling of the human head. PhD thesis, Royal Institute of Technology (KTH)
14.
go back to reference Fahlstedt M, Baeck K, Halldin P, SJ Vander, Goffin J, Depreitere B, Kleiven S (2012) Influence of impact velocity and angle in a detailed reconstruction of a bicycle accident. In: 2012 IRCOBI Conference Proceedings-International Research Council on the Biomechanics of Injury, pp 787–799 Fahlstedt M, Baeck K, Halldin P, SJ Vander, Goffin J, Depreitere B, Kleiven S (2012) Influence of impact velocity and angle in a detailed reconstruction of a bicycle accident. In: 2012 IRCOBI Conference Proceedings-International Research Council on the Biomechanics of Injury, pp 787–799
15.
go back to reference Kleiven S (2006) Evaluation of head injury criteria using a finite element model validated against experiments on localized brain motion, intracerebral acceleration, and intracranial pressure. Int J Crashworthiness 11:65–79CrossRef Kleiven S (2006) Evaluation of head injury criteria using a finite element model validated against experiments on localized brain motion, intracerebral acceleration, and intracranial pressure. Int J Crashworthiness 11:65–79CrossRef
16.
go back to reference Kleiven S (2007) Predictors for traumatic brain injuries evaluated through accident reconstructions. Stapp Car Crash J 51:81–114PubMed Kleiven S (2007) Predictors for traumatic brain injuries evaluated through accident reconstructions. Stapp Car Crash J 51:81–114PubMed
17.
go back to reference Kleiven S, von Holst H (2002) Consequences of head size following trauma to the human head. J Biomech 35:153–160CrossRefPubMed Kleiven S, von Holst H (2002) Consequences of head size following trauma to the human head. J Biomech 35:153–160CrossRefPubMed
18.
go back to reference Belytschko T, Liu WK, Moran B, Elkhodary K (2000) Nonlinear finite elements for continua and structures. Wiley, New York, pp 147–231 Belytschko T, Liu WK, Moran B, Elkhodary K (2000) Nonlinear finite elements for continua and structures. Wiley, New York, pp 147–231
19.
go back to reference McIlwain H, Bachelard HS (Eds) (1985) Chapter 3. Chemical composition of the brain, pp 32-60, Biochemistry and the Central Nervous System. Churchill Livingstone, Edinburgh McIlwain H, Bachelard HS (Eds) (1985) Chapter 3. Chemical composition of the brain, pp 32-60, Biochemistry and the Central Nervous System. Churchill Livingstone, Edinburgh
21.
go back to reference Lodish H, Berk A, Zipursky SL, Matsudaira P, Baltimore D, Darnell J (2000) Chapter 2. molecular cell biology. In: Molecular cell biology. W. H. Freeman Lodish H, Berk A, Zipursky SL, Matsudaira P, Baltimore D, Darnell J (2000) Chapter 2. molecular cell biology. In: Molecular cell biology. W. H. Freeman
22.
go back to reference Almasi G, Andreoni W, Beece D, Berne BJ, Bright A, Brunheroto J, Cascaval C, Castanos J, Coteus P, Crumley P, Curioni A, Denneau M, Donath W, Eleftheriou M, Flitch B, Fleischer B, Georgiou CJ, Germain R, Giampapa M, Gresh D, Gupta M, Haring R, Ho H, Hochschild P, Hummel S, Jonas T, Lieber D, Martyna G, Maturu K, Moreira J, Newns D, Newton M, Philhower R, Picunko T, Pitera J, Pitman M, Rand R, Royyuru A, Salapura V, Sanomiya A, Shah R, Sham Y, Singh S, Snir M, Suits F, Swetz R, Swope WC, Vishnumurthy N, Ward TJC, Warren H, Zhou R (2001) Blue gene: a vision for protein science using a petaflop supercomputer. IBM Syst J 40:310–327CrossRef Almasi G, Andreoni W, Beece D, Berne BJ, Bright A, Brunheroto J, Cascaval C, Castanos J, Coteus P, Crumley P, Curioni A, Denneau M, Donath W, Eleftheriou M, Flitch B, Fleischer B, Georgiou CJ, Germain R, Giampapa M, Gresh D, Gupta M, Haring R, Ho H, Hochschild P, Hummel S, Jonas T, Lieber D, Martyna G, Maturu K, Moreira J, Newns D, Newton M, Philhower R, Picunko T, Pitera J, Pitman M, Rand R, Royyuru A, Salapura V, Sanomiya A, Shah R, Sham Y, Singh S, Snir M, Suits F, Swetz R, Swope WC, Vishnumurthy N, Ward TJC, Warren H, Zhou R (2001) Blue gene: a vision for protein science using a petaflop supercomputer. IBM Syst J 40:310–327CrossRef
23.
go back to reference Shirts M, Pande VS (2000) Computing: screen savers of the world unite! Science (New York, NY) 290:1903CrossRef Shirts M, Pande VS (2000) Computing: screen savers of the world unite! Science (New York, NY) 290:1903CrossRef
24.
25.
go back to reference Javadi Y, Fernandez JM, Perez-Jimenez R (2013) Protein folding under mechanical forces: a physiological view. Physiology 28:9–17CrossRefPubMed Javadi Y, Fernandez JM, Perez-Jimenez R (2013) Protein folding under mechanical forces: a physiological view. Physiology 28:9–17CrossRefPubMed
27.
go back to reference Liphardt J, Onoa B, Smith SB, Tinoco I, Bustamante C (2001) Reversible unfolding of single RNA molecules by mechanical force. Science 292:733–737CrossRefPubMed Liphardt J, Onoa B, Smith SB, Tinoco I, Bustamante C (2001) Reversible unfolding of single RNA molecules by mechanical force. Science 292:733–737CrossRefPubMed
29.
go back to reference Hillson N, Onuchic JN, Garcá AE (1999) Pressure-induced protein-folding/unfolding kinetics. Proc Natl Acad Sci 96:14,848–14,853CrossRef Hillson N, Onuchic JN, Garcá AE (1999) Pressure-induced protein-folding/unfolding kinetics. Proc Natl Acad Sci 96:14,848–14,853CrossRef
30.
go back to reference Paci E (2002) High pressure simulations of biomolecules. BBA-Protein Struct M 1595:185–200CrossRef Paci E (2002) High pressure simulations of biomolecules. BBA-Protein Struct M 1595:185–200CrossRef
31.
go back to reference Shepherd VA (2006) The cytomatrix as a cooperative system of macromolecular and water networks. Curr Topics Develop Biol 75:171–223CrossRef Shepherd VA (2006) The cytomatrix as a cooperative system of macromolecular and water networks. Curr Topics Develop Biol 75:171–223CrossRef
32.
go back to reference Zuo GH, Hu J, Fang HP (2007) Protein folding under mediation of ordering water: an off-lattice gbar o-like model study. Chin Phys Lett 24:2426–2429CrossRef Zuo GH, Hu J, Fang HP (2007) Protein folding under mediation of ordering water: an off-lattice gbar o-like model study. Chin Phys Lett 24:2426–2429CrossRef
33.
go back to reference Fink AL, Calciano LJ, Goto Y, Kurotsu T, Palleros DR (1994) Classification of acid denaturation of proteins: intermediates and unfolded states. Biochemistry 33:12,504–12,511CrossRef Fink AL, Calciano LJ, Goto Y, Kurotsu T, Palleros DR (1994) Classification of acid denaturation of proteins: intermediates and unfolded states. Biochemistry 33:12,504–12,511CrossRef
34.
go back to reference Narhi LO, Philo JS, Li T, Zhang M, Samal B, Arakawa T (1996) Induction of α-helix in the β-sheet protein tumor necrosis factor-α: acid-induced denaturation. Biochemistry 35:11,454–11,460CrossRef Narhi LO, Philo JS, Li T, Zhang M, Samal B, Arakawa T (1996) Induction of α-helix in the β-sheet protein tumor necrosis factor-α: acid-induced denaturation. Biochemistry 35:11,454–11,460CrossRef
36.
go back to reference Modig K, Kurian E, Prendergast FG, Halle B (2003) Water and urea interactions with the native and unfolded forms of a β-barrel protein. Protein Sci 12:2768–2781CrossRefPubMedCentralPubMed Modig K, Kurian E, Prendergast FG, Halle B (2003) Water and urea interactions with the native and unfolded forms of a β-barrel protein. Protein Sci 12:2768–2781CrossRefPubMedCentralPubMed
37.
go back to reference Rossky PJ (2008) Protein denaturation by urea: slash and bond. Proc Natl Acad Sci 105:16,825–16,826CrossRef Rossky PJ (2008) Protein denaturation by urea: slash and bond. Proc Natl Acad Sci 105:16,825–16,826CrossRef
38.
go back to reference Schüle S, Frieß W, Bechtold-Peters K, Garidel P (2007) Conformational analysis of protein secondary structure during spray-drying of antibody/mannitol formulations. Eur J Pharm Biopharm 65:1–9CrossRefPubMed Schüle S, Frieß W, Bechtold-Peters K, Garidel P (2007) Conformational analysis of protein secondary structure during spray-drying of antibody/mannitol formulations. Eur J Pharm Biopharm 65:1–9CrossRefPubMed
39.
go back to reference Kaushik JK, Bhat R (1998) Thermal stability of proteins in aqueous polyol solutions: role of the surface tension of water in the stabilizing effect of polyols. J Phys Chem B 102:7058–7066CrossRef Kaushik JK, Bhat R (1998) Thermal stability of proteins in aqueous polyol solutions: role of the surface tension of water in the stabilizing effect of polyols. J Phys Chem B 102:7058–7066CrossRef
40.
go back to reference Li HB, Linke WA, Oberhauser AF, Carrion-Vazquez M, Kerkvliet JG, Lu H, Marszalek PE, Fernandez JM (2002) Reverse engineering of the giant muscle protein titin. Nature 418:998–1002CrossRefPubMed Li HB, Linke WA, Oberhauser AF, Carrion-Vazquez M, Kerkvliet JG, Lu H, Marszalek PE, Fernandez JM (2002) Reverse engineering of the giant muscle protein titin. Nature 418:998–1002CrossRefPubMed
42.
go back to reference Walter P, Ron D (2011) The unfolded protein response: from stress pathway to homeostatic regulation. Science 334:1081–1086CrossRefPubMed Walter P, Ron D (2011) The unfolded protein response: from stress pathway to homeostatic regulation. Science 334:1081–1086CrossRefPubMed
Metadata
Title
Higher impact energy in traumatic brain injury interferes with noncovalent and covalent bonds resulting in cytotoxic brain tissue edema as measured with computational simulation
Authors
Hans von Holst
Xiaogai Li
Publication date
01-04-2015
Publisher
Springer Vienna
Published in
Acta Neurochirurgica / Issue 4/2015
Print ISSN: 0001-6268
Electronic ISSN: 0942-0940
DOI
https://doi.org/10.1007/s00701-015-2368-x

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