Skip to main content
Top
Published in: Molecular Cancer 1/2010

Open Access 01-12-2010 | Research

Extensive analysis of D7S486 in primary gastric cancer supports TESTIN as a candidate tumor suppressor gene

Authors: Haiqing Ma, Desheng Weng, Yibing Chen, Wei Huang, Ke Pan, Hui Wang, Jiancong Sun, Qijing Wang, Zhiwei Zhou, Huiyun Wang, Jianchuan Xia

Published in: Molecular Cancer | Issue 1/2010

Login to get access

Abstract

Background

High frequency of loss of heterozygosity (LOH) was found at D7S486 in primary gastric cancer (GC). And we found a high frequency of LOH region on 7q31 in primary GC from China, and identified D7S486 to be the most frequent LOH locus. This study was aimed to determine what genes were affected by the LOH and served as tumor suppressor genes (TSGs) in this region. Here, a high-throughput single nucleotide polymorphisms (SNPs) microarray fabricated in-house was used to analyze the LOH status around D7S486 on 7q31 in 75 patients with primary GC. Western blot, immunohistochemistry, and RT-PCR were used to assess the protein and mRNA expression of TESTIN (TES) in 50 and 140 primary GC samples, respectively. MTS assay was used to investigate the effect of TES overexpression on the proliferation of GC cell lines. Mutation and methylation analysis were performed to explore possible mechanisms of TES inactivation in GC.

Results

LOH analysis discovered five candidate genes (ST7, FOXP2, MDFIC, TES and CAV1) whose frequencies of LOH were higher than 30%. However, only TES showed the potential to be a TSG associated with GC. Among 140 pairs of GC samples, decreased TES mRNA level was found in 96 (68.6%) tumor tissues when compared with matched non-tumor tissues (p < 0.001). Also, reduced TES protein level was detected in 36 (72.0%) of all 50 tumor tissues by Western blot (p = 0.001). In addition, immunohistochemical staining result was in agreement with that of RT-PCR and Western blot. Down regulation of TES was shown to be correlated with tumor differentiation (p = 0.035) and prognosis (p = 0.035, log-rank test). Its overexpression inhibited the growth of three GC cell lines. Hypermethylation of TES promoter was a frequent event in primary GC and GC cell lines. However, no specific gene mutation was observed in the coding region of the TES gene.

Conclusions

Collectively, all results support the role of TES as a TSG in gastric carcinogenesis and that TES is inactivated primarily by LOH and CpG island methylation.
Appendix
Available only for authorised users
Literature
1.
go back to reference Phan AT, Ajani JA: Gastric carcinoma. Curr Oncol Rep. 2004, 6 (3): 192-198. 10.1007/s11912-004-0049-7CrossRefPubMed Phan AT, Ajani JA: Gastric carcinoma. Curr Oncol Rep. 2004, 6 (3): 192-198. 10.1007/s11912-004-0049-7CrossRefPubMed
2.
go back to reference Nishizuka S, Tamura G, Terashima M, Satodate R: Commonly deleted region on the long arm of chromosome 7 in differentiated adenocarcinoma of the stomach. Br J Cancer. 1997, 76 (12): 1567-1571.PubMedCentralCrossRefPubMed Nishizuka S, Tamura G, Terashima M, Satodate R: Commonly deleted region on the long arm of chromosome 7 in differentiated adenocarcinoma of the stomach. Br J Cancer. 1997, 76 (12): 1567-1571.PubMedCentralCrossRefPubMed
3.
go back to reference Xia JC, Weng DS, Li JT, Qin HD, Mai SJ, Feng BJ, Fan Q, Feng QS, Huang LX, Yu XJ, Pan ZZ, Li YQ, Wang QJ, Zhan YQ, Chen SP, He J, Huang WL, Wu PH, Zeng YX: Loss of heterozygosity analysis of a candidate gastric carcinoma tumor suppressor locus at 7q31. Cancer Genet Cytogenet. 2006, 166 (2): 166-172. 10.1016/j.cancergencyto.2005.11.005CrossRefPubMed Xia JC, Weng DS, Li JT, Qin HD, Mai SJ, Feng BJ, Fan Q, Feng QS, Huang LX, Yu XJ, Pan ZZ, Li YQ, Wang QJ, Zhan YQ, Chen SP, He J, Huang WL, Wu PH, Zeng YX: Loss of heterozygosity analysis of a candidate gastric carcinoma tumor suppressor locus at 7q31. Cancer Genet Cytogenet. 2006, 166 (2): 166-172. 10.1016/j.cancergencyto.2005.11.005CrossRefPubMed
4.
go back to reference Wang HY, Luo M, Tereshchenko IV, Frikker DM, Cui X, Li JY, Hu G, Chu Y, Azaro MA, Lin Y, Shen L, Yang Q, Kambouris ME, Gao R, Shih W, Li H: A genotyping system capable of simultaneously analyzing >1000 single nucleotide polymorphisms in a haploid genome. Genome Res. 2005, 15 (2): 276-283. 10.1101/gr.2885205PubMedCentralCrossRefPubMed Wang HY, Luo M, Tereshchenko IV, Frikker DM, Cui X, Li JY, Hu G, Chu Y, Azaro MA, Lin Y, Shen L, Yang Q, Kambouris ME, Gao R, Shih W, Li H: A genotyping system capable of simultaneously analyzing >1000 single nucleotide polymorphisms in a haploid genome. Genome Res. 2005, 15 (2): 276-283. 10.1101/gr.2885205PubMedCentralCrossRefPubMed
5.
go back to reference Zenklusen JC, Conti CJ, Green ED: Mutational and functional analyses reveal that ST7 is a highly conserved tumor-suppressor gene on human chromosome 7q31. Nat Genet. 2001, 27 (4): 392-398. 10.1038/86891CrossRefPubMed Zenklusen JC, Conti CJ, Green ED: Mutational and functional analyses reveal that ST7 is a highly conserved tumor-suppressor gene on human chromosome 7q31. Nat Genet. 2001, 27 (4): 392-398. 10.1038/86891CrossRefPubMed
6.
go back to reference Engelman JA, Zhang XL, Galbiati F, Lisanti MP: Chromosomal localization, genomic organization, and developmental expression of the murine caveolin gene family (Cav-1, -2, and -3). Cav-1 and Cav-2 genes map to a known tumor suppressor locus (6-A2/7q31). FEBS Lett. 1998, 429 (3): 330-336. 10.1016/S0014-5793(98)00619-XCrossRefPubMed Engelman JA, Zhang XL, Galbiati F, Lisanti MP: Chromosomal localization, genomic organization, and developmental expression of the murine caveolin gene family (Cav-1, -2, and -3). Cav-1 and Cav-2 genes map to a known tumor suppressor locus (6-A2/7q31). FEBS Lett. 1998, 429 (3): 330-336. 10.1016/S0014-5793(98)00619-XCrossRefPubMed
7.
go back to reference Drusco A, Zanesi N, Roldo C, Trapasso F, Farber JL, Fong LY, Croce CM: Knockout mice reveal a tumor suppressor function for Testin. Proc Natl Acad Sci USA. 2005, 102 (31): 10947-10951. 10.1073/pnas.0504934102PubMedCentralCrossRefPubMed Drusco A, Zanesi N, Roldo C, Trapasso F, Farber JL, Fong LY, Croce CM: Knockout mice reveal a tumor suppressor function for Testin. Proc Natl Acad Sci USA. 2005, 102 (31): 10947-10951. 10.1073/pnas.0504934102PubMedCentralCrossRefPubMed
8.
go back to reference Gunduz E, Gunduz M, Beder L, Nagatsuka H, Fukushima K, Sutcu R, Delibas N, Yamanaka N, Shimizu K, Nagai N: Downregulation of TESTIN and its association with cancer history and a tendency toward poor survival in head and neck squamous cell carcinoma. Arch Otolaryngol Head Neck Surg. 2009, 135 (3): 254-260. 10.1001/archoto.2008.560CrossRefPubMed Gunduz E, Gunduz M, Beder L, Nagatsuka H, Fukushima K, Sutcu R, Delibas N, Yamanaka N, Shimizu K, Nagai N: Downregulation of TESTIN and its association with cancer history and a tendency toward poor survival in head and neck squamous cell carcinoma. Arch Otolaryngol Head Neck Surg. 2009, 135 (3): 254-260. 10.1001/archoto.2008.560CrossRefPubMed
9.
go back to reference Sarti M, Sevignani C, Calin GA, Aqeilan R, Shimizu M, Pentimalli F, Picchio MC, Godwin A, Rosenberg A, Drusco A, Negrini M, Croce CM: Adenoviral transduction of TESTIN gene into breast and uterine cancer cell lines promotes apoptosis and tumor reduction in vivo. Clin Cancer Res. 2005, 11 (2 Pt 1): 806-813.PubMed Sarti M, Sevignani C, Calin GA, Aqeilan R, Shimizu M, Pentimalli F, Picchio MC, Godwin A, Rosenberg A, Drusco A, Negrini M, Croce CM: Adenoviral transduction of TESTIN gene into breast and uterine cancer cell lines promotes apoptosis and tumor reduction in vivo. Clin Cancer Res. 2005, 11 (2 Pt 1): 806-813.PubMed
10.
go back to reference Tatarelli C, Linnenbach A, Mimori K, Croce CM: Characterization of the human TESTIN gene localized in the FRA7G region at 7q31.2. Genomics. 2000, 68 (1): 1-12. 10.1006/geno.2000.6272CrossRefPubMed Tatarelli C, Linnenbach A, Mimori K, Croce CM: Characterization of the human TESTIN gene localized in the FRA7G region at 7q31.2. Genomics. 2000, 68 (1): 1-12. 10.1006/geno.2000.6272CrossRefPubMed
11.
go back to reference Tobias ES, Hurlstone AF, MacKenzie E, McFarlane R, Black DM: The TES gene at 7q31.1 is methylated in tumours and encodes a novel growth-suppressing LIM domain protein. Oncogene. 2001, 20 (22): 2844-2853. 10.1038/sj.onc.1204433CrossRefPubMed Tobias ES, Hurlstone AF, MacKenzie E, McFarlane R, Black DM: The TES gene at 7q31.1 is methylated in tumours and encodes a novel growth-suppressing LIM domain protein. Oncogene. 2001, 20 (22): 2844-2853. 10.1038/sj.onc.1204433CrossRefPubMed
12.
go back to reference Jones PA, Taylor SM: Cellular differentiation, cytidine analogs and DNA methylation. Cell. 1980, 20 (1): 85-93. 10.1016/0092-8674(80)90237-8CrossRefPubMed Jones PA, Taylor SM: Cellular differentiation, cytidine analogs and DNA methylation. Cell. 1980, 20 (1): 85-93. 10.1016/0092-8674(80)90237-8CrossRefPubMed
13.
go back to reference Li JT, Fu L, Xia JC, Feng BJ, Mai SJ, Yu XJ, Huang LX, Feng QS, Pan ZZ, Zhan YQ: Minimal commonly deleted regions on chromosome 7q31 in primary gastric carcinoma and its clinical significance. Ai Zheng. 2005, 24 (11): 1306-1311.PubMed Li JT, Fu L, Xia JC, Feng BJ, Mai SJ, Yu XJ, Huang LX, Feng QS, Pan ZZ, Zhan YQ: Minimal commonly deleted regions on chromosome 7q31 in primary gastric carcinoma and its clinical significance. Ai Zheng. 2005, 24 (11): 1306-1311.PubMed
14.
go back to reference Weng DS, Li JT, Mai SJ, Pan ZZ, Feng BJ, Feng QS, Huang LX, Wang QJ, Li YQ, Yu XJ, Chen SP, He J, Xia JC: Identification of a new target region on the long arm of chromosome 7 in gastric carcinoma by loss of heterozygosity. World J Gastroenterol. 2006, 12 (15): 2437-2440.PubMedCentralPubMed Weng DS, Li JT, Mai SJ, Pan ZZ, Feng BJ, Feng QS, Huang LX, Wang QJ, Li YQ, Yu XJ, Chen SP, He J, Xia JC: Identification of a new target region on the long arm of chromosome 7 in gastric carcinoma by loss of heterozygosity. World J Gastroenterol. 2006, 12 (15): 2437-2440.PubMedCentralPubMed
15.
go back to reference Barresi V, Giuffre G, Vitarelli E, Todaro P, Tuccari G: Caveolin-1 immuno-expression in human gastric cancer: histopathogenetic hypotheses. Virchows Arch. 2008, 453 (6): 571-578. 10.1007/s00428-008-0681-yCrossRefPubMed Barresi V, Giuffre G, Vitarelli E, Todaro P, Tuccari G: Caveolin-1 immuno-expression in human gastric cancer: histopathogenetic hypotheses. Virchows Arch. 2008, 453 (6): 571-578. 10.1007/s00428-008-0681-yCrossRefPubMed
16.
go back to reference Zhang HK, Pan K, Wang H, Weng DS, Song HF, Zhou J, Huang W, Li JJ, Chen MS, Xia JC: Decreased expression of ING2 gene and its clinicopathological significance in hepatocellular carcinoma. Cancer Lett. 2008, 261 (2): 183-192. 10.1016/j.canlet.2007.11.019CrossRefPubMed Zhang HK, Pan K, Wang H, Weng DS, Song HF, Zhou J, Huang W, Li JJ, Chen MS, Xia JC: Decreased expression of ING2 gene and its clinicopathological significance in hepatocellular carcinoma. Cancer Lett. 2008, 261 (2): 183-192. 10.1016/j.canlet.2007.11.019CrossRefPubMed
17.
go back to reference Chene L, Giroud C, Desgrandchamps F, Boccon-Gibod L, Cussenot O, Berthon P, Latil A: Extensive analysis of the 7q31 region in human prostate tumors supports TES as the best candidate tumor suppressor gene. Int J Cancer. 2004, 111 (5): 798-804. 10.1002/ijc.20337CrossRefPubMed Chene L, Giroud C, Desgrandchamps F, Boccon-Gibod L, Cussenot O, Berthon P, Latil A: Extensive analysis of the 7q31 region in human prostate tumors supports TES as the best candidate tumor suppressor gene. Int J Cancer. 2004, 111 (5): 798-804. 10.1002/ijc.20337CrossRefPubMed
18.
go back to reference Baylin SB, Herman JG: DNA hypermethylation in tumorigenesis: epigenetics joins genetics. Trends Genet. 2000, 16 (4): 168-174. 10.1016/S0168-9525(99)01971-XCrossRefPubMed Baylin SB, Herman JG: DNA hypermethylation in tumorigenesis: epigenetics joins genetics. Trends Genet. 2000, 16 (4): 168-174. 10.1016/S0168-9525(99)01971-XCrossRefPubMed
19.
go back to reference Singal R, Ginder GD: DNA methylation. Blood. 1999, 93 (12): 4059-4070.PubMed Singal R, Ginder GD: DNA methylation. Blood. 1999, 93 (12): 4059-4070.PubMed
20.
go back to reference Huang Q, Sacks PG, Mo J, McCormick SA, Iacob CE, Guo L, Schaefer S, Schantz SP: A simple method for fixation and microdissection of frozen fresh tissue sections for molecular cytogenetic analysis of cancers. Biotech Histochem. 2005, 80 (3-4): 147-156. 10.1080/10520290500382806CrossRefPubMed Huang Q, Sacks PG, Mo J, McCormick SA, Iacob CE, Guo L, Schaefer S, Schantz SP: A simple method for fixation and microdissection of frozen fresh tissue sections for molecular cytogenetic analysis of cancers. Biotech Histochem. 2005, 80 (3-4): 147-156. 10.1080/10520290500382806CrossRefPubMed
21.
go back to reference Zhang HK, Ma HQ, Wang QJ, Chen MS, Weng DS, Wang H, Zhou J, Li YQ, Sun JC, Chen YB, Liang XT, Zhao JJ, Pan K, Wang H, Xia JC: Analysis of loss of heterozygosity on chromosome 4q in hepatocellular carcinoma using high-throughput SNP array. Oncol Rep. 2010, 23 (2): 445-55.PubMed Zhang HK, Ma HQ, Wang QJ, Chen MS, Weng DS, Wang H, Zhou J, Li YQ, Sun JC, Chen YB, Liang XT, Zhao JJ, Pan K, Wang H, Xia JC: Analysis of loss of heterozygosity on chromosome 4q in hepatocellular carcinoma using high-throughput SNP array. Oncol Rep. 2010, 23 (2): 445-55.PubMed
22.
go back to reference Pastinen T, Kurg A, Metspalu A, Peltonen L, Syvanen AC: Minisequencing: a specific tool for DNA analysis and diagnostics on oligonucleotide arrays. Genome Res. 1997, 7 (6): 606-614.PubMed Pastinen T, Kurg A, Metspalu A, Peltonen L, Syvanen AC: Minisequencing: a specific tool for DNA analysis and diagnostics on oligonucleotide arrays. Genome Res. 1997, 7 (6): 606-614.PubMed
23.
go back to reference Pastinen T, Raitio M, Lindroos K, Tainola P, Peltonen L, Syvanen AC: A system for specific, high-throughput genotyping by allele-specific primer extension on microarrays. Genome Res. 2000, 10 (7): 1031-1042. 10.1101/gr.10.7.1031PubMedCentralCrossRefPubMed Pastinen T, Raitio M, Lindroos K, Tainola P, Peltonen L, Syvanen AC: A system for specific, high-throughput genotyping by allele-specific primer extension on microarrays. Genome Res. 2000, 10 (7): 1031-1042. 10.1101/gr.10.7.1031PubMedCentralCrossRefPubMed
24.
go back to reference Shumaker JM, Metspalu A, Caskey CT: Mutation detection by solid phase primer extension. Hum Mutat. 1996, 7 (4): 346-354. 10.1002/(SICI)1098-1004(1996)7:4<346::AID-HUMU9>3.0.CO;2-6CrossRefPubMed Shumaker JM, Metspalu A, Caskey CT: Mutation detection by solid phase primer extension. Hum Mutat. 1996, 7 (4): 346-354. 10.1002/(SICI)1098-1004(1996)7:4<346::AID-HUMU9>3.0.CO;2-6CrossRefPubMed
25.
go back to reference Hu G, Wang HY, Greenawalt DM, Azaro MA, Luo M, Tereshchenko IV, Cui X, Yang Q, Gao R, Shen L, Li H: AccuTyping: new algorithms for automated analysis of data from high-throughput genotyping with oligonucleotide microarrays. Nucleic Acids Res. 2006, 34 (17): e116- 10.1093/nar/gkl601PubMedCentralCrossRefPubMed Hu G, Wang HY, Greenawalt DM, Azaro MA, Luo M, Tereshchenko IV, Cui X, Yang Q, Gao R, Shen L, Li H: AccuTyping: new algorithms for automated analysis of data from high-throughput genotyping with oligonucleotide microarrays. Nucleic Acids Res. 2006, 34 (17): e116- 10.1093/nar/gkl601PubMedCentralCrossRefPubMed
Metadata
Title
Extensive analysis of D7S486 in primary gastric cancer supports TESTIN as a candidate tumor suppressor gene
Authors
Haiqing Ma
Desheng Weng
Yibing Chen
Wei Huang
Ke Pan
Hui Wang
Jiancong Sun
Qijing Wang
Zhiwei Zhou
Huiyun Wang
Jianchuan Xia
Publication date
01-12-2010
Publisher
BioMed Central
Published in
Molecular Cancer / Issue 1/2010
Electronic ISSN: 1476-4598
DOI
https://doi.org/10.1186/1476-4598-9-190

Other articles of this Issue 1/2010

Molecular Cancer 1/2010 Go to the issue
Webinar | 19-02-2024 | 17:30 (CET)

Keynote webinar | Spotlight on antibody–drug conjugates in cancer

Antibody–drug conjugates (ADCs) are novel agents that have shown promise across multiple tumor types. Explore the current landscape of ADCs in breast and lung cancer with our experts, and gain insights into the mechanism of action, key clinical trials data, existing challenges, and future directions.

Dr. Véronique Diéras
Prof. Fabrice Barlesi
Developed by: Springer Medicine