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Published in: Archives of Virology 3/2019

01-03-2019 | Annotated Sequence Record

Escherichia coli bacteriophage Gostya9, representing a new species within the genus T5virus

Authors: Alla K. Golomidova, Eugene E. Kulikov, Vladislav V. Babenko, Pavel A. Ivanov, Nikolai S. Prokhorov, Andrey V. Letarov

Published in: Archives of Virology | Issue 3/2019

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Abstract

Escherichia coli bacteriophage Gostya9 (genus T5virus) was isolated from horse feces collected in Moscow, Russia, in 2013. This phage was associated in a single plaque with the previously reported phage 9g and was subsequently purified. Analysis of the complete genomic sequence of Gostya9 revealed that it is closely related to the T5-like bacteriophage DT57C, which had been isolated at the same location in 2007. These two viruses share 79.5% nucleotide sequence identity, which is below the 95% threshold applied currently to demarcate bacteriophage species. The most significant features distinguishing Gostya9 from DT57C include 1) the presence of one long tail fiber protein gene, 122c (ltf), instead of the two genes, ltfA and ltfB, that are present in DT57C; 2) the absence of the gene for the receptor-blocking lytic conversion lipoprotein precursor llp; and 3) the divergence of the receptor-recognition protein, pb5, which is only distantly related at the amino acid sequence level. The observed features of the Gostya9 adsorption apparatus are suggestive of a possible novel specificity for the final receptor and make this phage interesting for possible direct application in phage therapy of E. coli infections or as a source of receptor-recognition protein for engineering new phage specificities.
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Metadata
Title
Escherichia coli bacteriophage Gostya9, representing a new species within the genus T5virus
Authors
Alla K. Golomidova
Eugene E. Kulikov
Vladislav V. Babenko
Pavel A. Ivanov
Nikolai S. Prokhorov
Andrey V. Letarov
Publication date
01-03-2019
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 3/2019
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-018-4113-2

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