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Published in: BMC Cancer 1/2018

Open Access 01-12-2018 | Research article

Data mining of digitized health records in a resource-constrained setting reveals that timely immunophenotyping is associated with improved breast cancer outcomes

Authors: Arturo López-Pineda, Mario F Rodríguez-Moran, Cleto Álvarez-Aguilar, Sarah M Fuentes Valle, Román Acosta-Rosales, Ami S Bhatt, Shruti N Sheth, Carlos D Bustamante

Published in: BMC Cancer | Issue 1/2018

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Abstract

Background

Organizations that issue guidance on breast cancer recommend the use of immunohistochemistry (IHC) for providing appropriate and precise care. However, little focus has been directed to the identification of maximum allowable turnaround times for IHC, which is necessary given the diversity of hospital settings in the world. Much less effort has been committed to the development of digital tools that allow hospital administrators to monitor service utilization histories of their patients.

Methods

In this retrospective cohort study, we reviewed electronic and paper medical records of all suspected breast cancer patients treated at one secondary-care hospital of the Mexican Institute of Social Security (IMSS), located in western Mexico. We then followed three years of medical history of those patients with IHC testing.

Results

In 2014, there were 402 breast cancer patients, of which 30 (7.4% of total) were tested for some IHC biomarker (ER, PR, HER2). The subtyping allowed doctors to adjust (56.7%) or confirm (43.3%) the initial therapeutic regimen. The average turnaround time was 56 days. Opportune IHC testing was found to be beneficial when it was available before or during the first rounds of chemotherapy.

Conclusions

The use of data mining tools applied to health record data revealed that there is an association between timely immunohistochemistry and improved outcomes in breast cancer patients. Based on this finding, inclusion of turnaround time in clinical guidelines is recommended. As much of the health data in the country becomes digitized, our visualization tools allow a digital dashboard of the hospital service utilization histories.
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Literature
1.
go back to reference Lips EH, Mulder L, de Ronde JJ, IAM M, Koolen BB, LFA W, et al. Breast cancer subtyping by immunohistochemistry and histological grade outperforms breast cancer intrinsic subtypes in predicting neoadjuvant chemotherapy response. Breast Cancer Res Treat Springer US. 2013;140:63–71.CrossRef Lips EH, Mulder L, de Ronde JJ, IAM M, Koolen BB, LFA W, et al. Breast cancer subtyping by immunohistochemistry and histological grade outperforms breast cancer intrinsic subtypes in predicting neoadjuvant chemotherapy response. Breast Cancer Res Treat Springer US. 2013;140:63–71.CrossRef
2.
go back to reference Won JR, Gao D, Chow C, Cheng J, Lau SYH, Ellis MJ, et al. A survey of immunohistochemical biomarkers for basal-like breast cancer against a gene expression profile gold standard. Mod Pathol. 2013;26:1438–50.CrossRef Won JR, Gao D, Chow C, Cheng J, Lau SYH, Ellis MJ, et al. A survey of immunohistochemical biomarkers for basal-like breast cancer against a gene expression profile gold standard. Mod Pathol. 2013;26:1438–50.CrossRef
3.
go back to reference Abu-Khalf M, Pusztai L. Influence of genomics on adjuvant treatments for pre-invasive and invasive breast cancer. Breast. 2013;22(Suppl 2):S83–7.CrossRef Abu-Khalf M, Pusztai L. Influence of genomics on adjuvant treatments for pre-invasive and invasive breast cancer. Breast. 2013;22(Suppl 2):S83–7.CrossRef
4.
go back to reference Cardenas Sanchez J, Rocha JEB, Piña VB, Sánchez GC, Erazo Valle-Solís AA, Balcázar CHF, et al. Mexican Consensus on the Diagnosis and Treatment of Breast Cancer: Seventh Revision - Colima 2017. Gaceta Mexicana de Oncología. 2017;16:7–78. Cardenas Sanchez J, Rocha JEB, Piña VB, Sánchez GC, Erazo Valle-Solís AA, Balcázar CHF, et al. Mexican Consensus on the Diagnosis and Treatment of Breast Cancer: Seventh Revision - Colima 2017. Gaceta Mexicana de Oncología. 2017;16:7–78.
5.
go back to reference Secretaria de Salud de Mexico. Diagnóstico y Tratamiento de la Patología Mamaria Benigna en Primer y Segundo Nivel de Atención; 2009. p. 1–66. Secretaria de Salud de Mexico. Diagnóstico y Tratamiento de la Patología Mamaria Benigna en Primer y Segundo Nivel de Atención; 2009. p. 1–66.
6.
go back to reference Secretaria de Salud de Mexico. Prevención, Tamizaje y Referencia Oportuna de Casos Sospechosos de Cáncer de Mama en el Primer Nivel de Anteción; 2011. p. 1–74. Secretaria de Salud de Mexico. Prevención, Tamizaje y Referencia Oportuna de Casos Sospechosos de Cáncer de Mama en el Primer Nivel de Anteción; 2011. p. 1–74.
7.
go back to reference Secretaria de Salud de Mexico. Diagnóstico y Tratamiento del Cáncer de Mama en Segundo y Tercer Nivel de Atención; 2012. p. 1–102. Secretaria de Salud de Mexico. Diagnóstico y Tratamiento del Cáncer de Mama en Segundo y Tercer Nivel de Atención; 2012. p. 1–102.
8.
go back to reference Lara-Medina F, Perez-Sanchez V, Saavedra-Perez D, Blake-Cerda M, Arce C, Motola-Kuba D, et al. Triple-negative breast cancer in Hispanic patients: high prevalence, poor prognosis, and association with menopausal status, body mass index, and parity. Cancer. 2011;117:3658–69.CrossRef Lara-Medina F, Perez-Sanchez V, Saavedra-Perez D, Blake-Cerda M, Arce C, Motola-Kuba D, et al. Triple-negative breast cancer in Hispanic patients: high prevalence, poor prognosis, and association with menopausal status, body mass index, and parity. Cancer. 2011;117:3658–69.CrossRef
9.
go back to reference Robles-Castillo J, Ruvalcaba-Limón E. Ginecologia y Obstetricia de Mexico. In: Cáncer de mama en mujeres mexicanas menores de 40 años, vol. 79; 2011. p. 482–8. Robles-Castillo J, Ruvalcaba-Limón E. Ginecologia y Obstetricia de Mexico. In: Cáncer de mama en mujeres mexicanas menores de 40 años, vol. 79; 2011. p. 482–8.
10.
go back to reference Villarreal-Garza C, Alvarez-Gomez RM, Perez-Plasencia C, Herrera LA, Herzog J, Castillo D, et al. Significant clinical impact of recurrent BRCA1 and BRCA2 mutations in Mexico. Cancer. 2015;121:372–8.CrossRef Villarreal-Garza C, Alvarez-Gomez RM, Perez-Plasencia C, Herrera LA, Herzog J, Castillo D, et al. Significant clinical impact of recurrent BRCA1 and BRCA2 mutations in Mexico. Cancer. 2015;121:372–8.CrossRef
11.
go back to reference Mohar-Betancourt A, Reynoso-Noveron N, Armas-Texta D, Gutierrez-Delgado C, Torres-Dominguez JA. Cancer trends in Mexico: essential data for the creation and follow-up of public policies. J Glob Oncol 2017;JGO.2016.007476–9. Mohar-Betancourt A, Reynoso-Noveron N, Armas-Texta D, Gutierrez-Delgado C, Torres-Dominguez JA. Cancer trends in Mexico: essential data for the creation and follow-up of public policies. J Glob Oncol 2017;JGO.2016.007476–9.
12.
go back to reference Shaaban AM, Purdie CA, Bartlett JMS, Stein RC, Lane S, Francis A, et al. HER2 testing for breast carcinoma: recommendations for rapid diagnostic pathways in clinical practice. J Clin Pathol; BMJ Publishing Group. 2014;67:161–7.CrossRef Shaaban AM, Purdie CA, Bartlett JMS, Stein RC, Lane S, Francis A, et al. HER2 testing for breast carcinoma: recommendations for rapid diagnostic pathways in clinical practice. J Clin Pathol; BMJ Publishing Group. 2014;67:161–7.CrossRef
13.
go back to reference Anderson BO, Yip C-H, Smith RA, Shyyan R, Sener SF, Eniu A, et al. Guideline implementation for breast healthcare in low-income and middle-income countries: overview of the breast health global initiative global summit 2007. Cancer Wiley Subscription Services, Inc., A Wiley Company; 2008. pp. 2221–2243. Anderson BO, Yip C-H, Smith RA, Shyyan R, Sener SF, Eniu A, et al. Guideline implementation for breast healthcare in low-income and middle-income countries: overview of the breast health global initiative global summit 2007. Cancer Wiley Subscription Services, Inc., A Wiley Company; 2008. pp. 2221–2243.
14.
go back to reference Carlson RW, Scavone JL, Koh W-J, McClure JS, Greer BE, Kumar R, et al. NCCN framework for resource stratification: a framework for providing and improving global quality oncology care. J Natl Compr Cancer Netw. 2016;14:961–9.CrossRef Carlson RW, Scavone JL, Koh W-J, McClure JS, Greer BE, Kumar R, et al. NCCN framework for resource stratification: a framework for providing and improving global quality oncology care. J Natl Compr Cancer Netw. 2016;14:961–9.CrossRef
15.
go back to reference Chuang LT, Temin S, Berek JS. Management and Care of Women with Invasive Cervical Cancer: American Society of Clinical Oncology resource-stratified clinical practice guideline summary. J Oncol Pract. 2016;12:693–6.CrossRef Chuang LT, Temin S, Berek JS. Management and Care of Women with Invasive Cervical Cancer: American Society of Clinical Oncology resource-stratified clinical practice guideline summary. J Oncol Pract. 2016;12:693–6.CrossRef
16.
go back to reference World Health Organization. Executive summary. National Cancer Control Programmes. Policies and Managerial Guidelines. 2012:1–24. World Health Organization. Executive summary. National Cancer Control Programmes. Policies and Managerial Guidelines. 2012:1–24.
17.
go back to reference Instituto Nacional de Estadística y Geografía. [Encuesta Intercensal 2015]. 2015. Instituto Nacional de Estadística y Geografía. [Encuesta Intercensal 2015]. 2015.
18.
go back to reference Instituto Mexicano para la Competitividad. Indice de Competitividad Estatal 2016; 2016. p. 1–202. Instituto Mexicano para la Competitividad. Indice de Competitividad Estatal 2016; 2016. p. 1–202.
19.
go back to reference Solomon JP, Dell'Aquila M, Fadare O, Hasteh F. Her2/neu status determination in breast Cancer. A Single Institutional Experience Using a Dual-Testing Approach With Immunohistochemistry and Fluorescence In Situ Hybridization Am J Clin Pathol. 2017;147:432–7.PubMed Solomon JP, Dell'Aquila M, Fadare O, Hasteh F. Her2/neu status determination in breast Cancer. A Single Institutional Experience Using a Dual-Testing Approach With Immunohistochemistry and Fluorescence In Situ Hybridization Am J Clin Pathol. 2017;147:432–7.PubMed
20.
go back to reference Lim TH, Lim AST, Thike AA, Tien SL, Tan PH. Implications of the updated 2013 American Society of Clinical Oncology/College of American Pathologists Guideline Recommendations on human epidermal growth factor receptor 2 gene testing using immunohistochemistry and fluorescence in situ hybridization for breast Cancer. Arch Pathol Lab Med. 2016;140:140–7.CrossRef Lim TH, Lim AST, Thike AA, Tien SL, Tan PH. Implications of the updated 2013 American Society of Clinical Oncology/College of American Pathologists Guideline Recommendations on human epidermal growth factor receptor 2 gene testing using immunohistochemistry and fluorescence in situ hybridization for breast Cancer. Arch Pathol Lab Med. 2016;140:140–7.CrossRef
21.
go back to reference Instituto Mexicano del Seguro Social. [Cuadro Basico de Medicamentos. Oncologia] Instituto Mexicano del Seguro Social; 2017. p. 1–48. Instituto Mexicano del Seguro Social. [Cuadro Basico de Medicamentos. Oncologia] Instituto Mexicano del Seguro Social; 2017. p. 1–48.
22.
go back to reference Novis DA, Zarbo RJ, Saladino AJ. Interinstitutional comparison of surgical biopsy diagnosis turnaround time: a College of American Pathologists Q-probes study of 5384 surgical biopsies in 157 small hospitals. Arch Pathol Lab Med. 1998;122:951–6.PubMed Novis DA, Zarbo RJ, Saladino AJ. Interinstitutional comparison of surgical biopsy diagnosis turnaround time: a College of American Pathologists Q-probes study of 5384 surgical biopsies in 157 small hospitals. Arch Pathol Lab Med. 1998;122:951–6.PubMed
23.
go back to reference Wolff AC, Hammond MEH, Hicks DG, Dowsett M, McShane LM, Allison KH, et al. Recommendations for human epidermal growth factor receptor 2 testing in breast Cancer: American Society of Clinical Oncology/College of American Pathologists Clinical Practice Guideline Update. J Clin Oncol. 2013;31:3997–4013.CrossRef Wolff AC, Hammond MEH, Hicks DG, Dowsett M, McShane LM, Allison KH, et al. Recommendations for human epidermal growth factor receptor 2 testing in breast Cancer: American Society of Clinical Oncology/College of American Pathologists Clinical Practice Guideline Update. J Clin Oncol. 2013;31:3997–4013.CrossRef
24.
go back to reference Morey AL, Brown B, Farshid G, Fox SB, Francis GD, McCue G, et al. Determining HER2 (ERBB2) amplification status in women with breast cancer: final results from the Australian in situ hybridisation program. Pathology Elsevier; 2016;48:535–542.CrossRef Morey AL, Brown B, Farshid G, Fox SB, Francis GD, McCue G, et al. Determining HER2 (ERBB2) amplification status in women with breast cancer: final results from the Australian in situ hybridisation program. Pathology Elsevier; 2016;48:535–542.CrossRef
25.
go back to reference Alshieban S, Al-Surimi K. Reducing turnaround time of surgical pathology reports in pathology and laboratory medicine departments. BMJ Qual Improv Rep BMJ Open Quality; 2015;4:u209223.w3773.CrossRef Alshieban S, Al-Surimi K. Reducing turnaround time of surgical pathology reports in pathology and laboratory medicine departments. BMJ Qual Improv Rep BMJ Open Quality; 2015;4:u209223.w3773.CrossRef
26.
go back to reference Boleij A, Tembuyser L, Taylor A, Kafatos G, Jenkins-Anderson S, Tack V, et al. PD-015A survey on current RAS-mutation testing practices in Europe. Ann Oncol Oxford University Press. 2015;26:iv105–5. Boleij A, Tembuyser L, Taylor A, Kafatos G, Jenkins-Anderson S, Tack V, et al. PD-015A survey on current RAS-mutation testing practices in Europe. Ann Oncol Oxford University Press. 2015;26:iv105–5.
27.
go back to reference Pathologists TRCO. Key Performance Indicators in Pathology; 2013. p. 1–23. Pathologists TRCO. Key Performance Indicators in Pathology; 2013. p. 1–23.
28.
go back to reference Instituto Mexicano del Seguro Social. Manual Metodológico de Indicadores Médicos 2016; 2016. p. 1–452. Instituto Mexicano del Seguro Social. Manual Metodológico de Indicadores Médicos 2016; 2016. p. 1–452.
Metadata
Title
Data mining of digitized health records in a resource-constrained setting reveals that timely immunophenotyping is associated with improved breast cancer outcomes
Authors
Arturo López-Pineda
Mario F Rodríguez-Moran
Cleto Álvarez-Aguilar
Sarah M Fuentes Valle
Román Acosta-Rosales
Ami S Bhatt
Shruti N Sheth
Carlos D Bustamante
Publication date
01-12-2018
Publisher
BioMed Central
Published in
BMC Cancer / Issue 1/2018
Electronic ISSN: 1471-2407
DOI
https://doi.org/10.1186/s12885-018-4833-4

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