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Published in: BMC Cancer 1/2023

Open Access 01-12-2023 | Research

CXCL10 is a prognostic marker for pancreatic adenocarcinoma and tumor microenvironment remodeling

Authors: Yuan Nie, Chao Liu, Qi Liu, Xuan Zhu

Published in: BMC Cancer | Issue 1/2023

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Abstract

Background:

The tumor microenvironment (TME) plays a crucial role in the progression of pancreatic adenocarcinoma (PAAD). However, challenges remain regarding the role played by TME associated genes in the prognosis of PAAD.

Methods:

The scores of tumor infiltrating immune cells (TICs), the immune and stroma scores of 182 PAAD patients in the Cancer Genome Atlas (TCGA) database were determined using CIBERSORT and ESTIMATE calculations. The final genes were identified by protein-protein interaction (PPI) networks and univariate Cox regression of differentially expressed genes. Finally, the correlation between gene expression and TCGA and clinical characteristics of patients in local hospital database was discussed. Gene set enrichment analysis (GSEA), the association between CXCL10 expression and TICs components were conducted.

Results:

In TCGA database and local hospital data, CXCL10 expression was correlated with the survival rate and TNM classification of patients with PAAD. Immune-related activities were enriched in the CXCL10 high expression group, while metabolic pathways were enriched in the CXCL10 low expression group. The expression of CXCL10 correlated with the proportion of TICs. CXCL10 expression was correlated with the proportion of TICs.

Conclusion:

CXCL10 is a potential prognostic marker for PAAD and provide additional insights into the treatment of PAAD based on TME transformation. However, more independent experimentation with the CXCL10 is need.
Appendix
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Metadata
Title
CXCL10 is a prognostic marker for pancreatic adenocarcinoma and tumor microenvironment remodeling
Authors
Yuan Nie
Chao Liu
Qi Liu
Xuan Zhu
Publication date
01-12-2023
Publisher
BioMed Central
Published in
BMC Cancer / Issue 1/2023
Electronic ISSN: 1471-2407
DOI
https://doi.org/10.1186/s12885-023-10615-w

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