Skip to main content
Top
Published in: Annals of Surgical Oncology 12/2010

01-12-2010 | Gastrointestinal Oncology

CpG Methylation of Transcription Factor 4 in Gastric Carcinoma

Authors: Jae Kyoon Joo, MD, PhD, Sang Hyun Kim, MD, Ho Gun Kim, MD, PhD, Dong Yi Kim, MD, PhD, Seong Yeob Ryu, MD, PhD, Kyung Hwa Lee, MD, PhD, Jae Hyuk Lee, MD, PhD

Published in: Annals of Surgical Oncology | Issue 12/2010

Login to get access

Abstract

Background

Epigenetic silencing of tumor-related genes by CpG island methylation is an important mechanism for the development of many tumors, including gastric carcinoma. Deregulation of transcription factor 4 (TCF4) by promoter methylation was recently shown to play a key role in gastric carcinogenesis.

Methods

The extent of methylation in the TCF4 promoter was assessed using methylation-specific polymerase chain reaction (MSP) and pyrosequencing (PS) in 120 gastric carcinoma (GC) samples collected during gastrectomy, and in 40 normal gastric mucosa samples.

Results

The PS analysis of GCs revealed a higher frequency of TCF4 methylation (75.8%; 91/120). The methylation frequency for TCF4 by both MSP and PS techniques was significantly higher in advanced (75.0 and 91.7%, respectively) compared with early (60.0 and 60.0%, respectively, p < 0.05) GCs. There was a significant difference in TCF4 methylation between GCs and normal gastric mucosa (67.5 vs. 40.0%, respectively, by MSP and 75.8 vs. 30.0%, respectively, by PS; p < 0.05). There was significant correlation between TCF4 methylation status by PS and tumor size (p = 0.004), Lauren classification (p = 0.043), depth of invasion (p < 0.001), nodal metastasis (p = 0.021), and tumor–node–metastasis (TNM) stage (p = 0.045).

Conclusions

These results suggest that inactivation of TCF4 by promoter methylation may play a role in the early stage of gastric carcinoma progression. Furthermore, standard polymerase chain reaction followed by PS may provide a more specific and quantitative diagnostic alternative to MSP, which may be of benefit in oncology research.
Literature
1.
go back to reference Toyota M, Ahuja N, Suzuki H, et al. Aberrant methylation in gastric cancer associated with the CpG island methylator phenotype. Cancer Res. 1999; 59:5438–42.PubMed Toyota M, Ahuja N, Suzuki H, et al. Aberrant methylation in gastric cancer associated with the CpG island methylator phenotype. Cancer Res. 1999; 59:5438–42.PubMed
3.
go back to reference Baylin SB, Herman JG. DNA hypermethylation in tumorigenesis: epigenetics joins genetics. Trends Genet. 2000; 16:168–74.CrossRefPubMed Baylin SB, Herman JG. DNA hypermethylation in tumorigenesis: epigenetics joins genetics. Trends Genet. 2000; 16:168–74.CrossRefPubMed
4.
go back to reference Toyota M, Issa JP. The role of DNA hypermethylation in human neoplasia. Electrophoresis. 2000; 21:329–33.CrossRefPubMed Toyota M, Issa JP. The role of DNA hypermethylation in human neoplasia. Electrophoresis. 2000; 21:329–33.CrossRefPubMed
6.
go back to reference Momparler RL, Ayoub J. Potential of 5-aza-2’-deoxycytidine (Decitabine) a potent inhibitor of DNA methylation for therapy of advanced non-small cell lung cancer. Lung Cancer. 2001; 34:S111–5.CrossRefPubMed Momparler RL, Ayoub J. Potential of 5-aza-2’-deoxycytidine (Decitabine) a potent inhibitor of DNA methylation for therapy of advanced non-small cell lung cancer. Lung Cancer. 2001; 34:S111–5.CrossRefPubMed
7.
go back to reference Esteller M. CpG island hypermethylation and tumour suppressor genes: a booming present, a brighter future. Oncogene. 2002; 21:5427–40.CrossRefPubMed Esteller M. CpG island hypermethylation and tumour suppressor genes: a booming present, a brighter future. Oncogene. 2002; 21:5427–40.CrossRefPubMed
8.
go back to reference Herman JG, Baylin SB. Gene silencing in cancer in association with promoter hypermethylation. N Engl J Med. 2003; 349:2042–54.CrossRefPubMed Herman JG, Baylin SB. Gene silencing in cancer in association with promoter hypermethylation. N Engl J Med. 2003; 349:2042–54.CrossRefPubMed
9.
go back to reference Grady WM, Willis J, Guilford PJ, et al. Methylation of the CDH1 promoter as the second genetic hit in hereditary diffuse gastric cancer. Nat Genet. 2000; 26:16–7.CrossRefPubMed Grady WM, Willis J, Guilford PJ, et al. Methylation of the CDH1 promoter as the second genetic hit in hereditary diffuse gastric cancer. Nat Genet. 2000; 26:16–7.CrossRefPubMed
10.
go back to reference Kim SK, Jang HR, Kim JH, et al. CpG methylation in exon 1 of transcription factor 4 increases with age in normal gastric mucosa and is associated with gene silencing in intestina-type gastric cancers. Carcinogenesis. 2008; 29:1623–31.CrossRefPubMed Kim SK, Jang HR, Kim JH, et al. CpG methylation in exon 1 of transcription factor 4 increases with age in normal gastric mucosa and is associated with gene silencing in intestina-type gastric cancers. Carcinogenesis. 2008; 29:1623–31.CrossRefPubMed
11.
go back to reference Oue N, Shigeishi H, Kuniyasu H, Yokozaki H, Kuraoka K, Ito R, Yasui W. Promoter hypermethylation of MGMT is associated with protein loss in gastric carcinoma. Int J Cancer. 2001; 93:805–9.CrossRefPubMed Oue N, Shigeishi H, Kuniyasu H, Yokozaki H, Kuraoka K, Ito R, Yasui W. Promoter hypermethylation of MGMT is associated with protein loss in gastric carcinoma. Int J Cancer. 2001; 93:805–9.CrossRefPubMed
13.
go back to reference Greene FL, Page DL, Fleming ID, Fritz A, Balch CM, Haller DG, Morrow M. AJCC cancer staging manual, 6th edn. New York: Springer; 2003. Greene FL, Page DL, Fleming ID, Fritz A, Balch CM, Haller DG, Morrow M. AJCC cancer staging manual, 6th edn. New York: Springer; 2003.
14.
go back to reference Goelz SE, Hamilton SR, Vogelstein B. Purification of DNA from formaldehyde fixed and paraffin embedded human tissue. Biochem Biophys Res Commun. 1985; 130:118–26.CrossRefPubMed Goelz SE, Hamilton SR, Vogelstein B. Purification of DNA from formaldehyde fixed and paraffin embedded human tissue. Biochem Biophys Res Commun. 1985; 130:118–26.CrossRefPubMed
15.
go back to reference Ogino S, Odze RD, Kawasaki T, et al. Correlation of pathologic features with CpG island methylator phenotype (CIMP) by quantitative DNA methylation analysis in colorectal carcinoma. Am J Surg Pathol. 2006; 30:1175–83.PubMed Ogino S, Odze RD, Kawasaki T, et al. Correlation of pathologic features with CpG island methylator phenotype (CIMP) by quantitative DNA methylation analysis in colorectal carcinoma. Am J Surg Pathol. 2006; 30:1175–83.PubMed
16.
go back to reference Lassar AB, Davis RL, Wright WE, et al. Functional activity of myogenic HLH proteins requires hetero-oligomerization with E12/E47-like proteins in vivo. Cell. 1991; 66:305–15.CrossRefPubMed Lassar AB, Davis RL, Wright WE, et al. Functional activity of myogenic HLH proteins requires hetero-oligomerization with E12/E47-like proteins in vivo. Cell. 1991; 66:305–15.CrossRefPubMed
17.
go back to reference Beck GR Jr, Zerler B, Moran E. Gene array analysis of osteoblast differentiation. Cell Growth Differ. 2001; 12:61–83.PubMed Beck GR Jr, Zerler B, Moran E. Gene array analysis of osteoblast differentiation. Cell Growth Differ. 2001; 12:61–83.PubMed
18.
go back to reference Quong MW, Romanow WJ, Murre C. E protein function in lymphocyte development. Annu Rev Immunol. 2002; 20:301–22.CrossRefPubMed Quong MW, Romanow WJ, Murre C. E protein function in lymphocyte development. Annu Rev Immunol. 2002; 20:301–22.CrossRefPubMed
19.
go back to reference Persson P, Jögi A, Grynfeld A, Påhlman S, Axelson H. HASH-1 and E2-2 are expressed in human neuroblastoma cells and form a functional complex. Biochem Biophys Res Commun. 2000; 274:22–31.CrossRefPubMed Persson P, Jögi A, Grynfeld A, Påhlman S, Axelson H. HASH-1 and E2-2 are expressed in human neuroblastoma cells and form a functional complex. Biochem Biophys Res Commun. 2000; 274:22–31.CrossRefPubMed
20.
go back to reference Kolligs FT, Nieman MT, Winer I, et al. ITF-2, a downstream target of the Wnt/TCF pathway, is activated in human cancers with b-catenin defects and promotes neoplastic transformation. Cancer Cell. 2002; 1:145–55.CrossRefPubMed Kolligs FT, Nieman MT, Winer I, et al. ITF-2, a downstream target of the Wnt/TCF pathway, is activated in human cancers with b-catenin defects and promotes neoplastic transformation. Cancer Cell. 2002; 1:145–55.CrossRefPubMed
21.
go back to reference Pagliuca A. Gallo P, De Luca P, Lania L. Class A helix-loop-helix proteins are positive regulators of several cyclin-dependent kinase inhibitors’ promoter activity and negatively affect cell growth. Cancer Res. 2000; 60:1376–82.PubMed Pagliuca A. Gallo P, De Luca P, Lania L. Class A helix-loop-helix proteins are positive regulators of several cyclin-dependent kinase inhibitors’ promoter activity and negatively affect cell growth. Cancer Res. 2000; 60:1376–82.PubMed
22.
go back to reference Brakensiek K, Wingen LU, Langer F, Kreipe H, Lehmann U. Quantitative high-resolution CpG island mapping with Pyrosequencing reveals disease-specific methylation patterns of the CDKN2B gene in myelodysplastic syndrome and myeloid leukemia. Clin Chem. 2007; 53:17–23.CrossRefPubMed Brakensiek K, Wingen LU, Langer F, Kreipe H, Lehmann U. Quantitative high-resolution CpG island mapping with Pyrosequencing reveals disease-specific methylation patterns of the CDKN2B gene in myelodysplastic syndrome and myeloid leukemia. Clin Chem. 2007; 53:17–23.CrossRefPubMed
23.
go back to reference Herman JG, Graff JR, Myohanen S, Nelkin BD, Baylin SB. Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands. Proc Natl Acad Sci USA. 1996; 93:9821–26.CrossRefPubMed Herman JG, Graff JR, Myohanen S, Nelkin BD, Baylin SB. Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands. Proc Natl Acad Sci USA. 1996; 93:9821–26.CrossRefPubMed
24.
go back to reference An Q, Liu Y, Gao Y, et al. Detection of p16 hypermethylation in circulating plasma DNA of non-small cell lung cancer patients. Cancer Lett. 2002; 188:109–14.CrossRefPubMed An Q, Liu Y, Gao Y, et al. Detection of p16 hypermethylation in circulating plasma DNA of non-small cell lung cancer patients. Cancer Lett. 2002; 188:109–14.CrossRefPubMed
25.
go back to reference Shaw RJ, Liloglou T, Rogers SN, et al. Promoter methylation of P16, RARh, E-cadherin, cyclin A1 and cytoglobin in oral cancer: quantitative evaluation using Pyrosequencing. Br J Cancer. 2006; 94:561–8.CrossRefPubMed Shaw RJ, Liloglou T, Rogers SN, et al. Promoter methylation of P16, RARh, E-cadherin, cyclin A1 and cytoglobin in oral cancer: quantitative evaluation using Pyrosequencing. Br J Cancer. 2006; 94:561–8.CrossRefPubMed
26.
go back to reference Colella S, Shen L, Baggerly KA, Issa JP, Krahe R. Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites. Biotechniques. 2003; 35:146–50.PubMed Colella S, Shen L, Baggerly KA, Issa JP, Krahe R. Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites. Biotechniques. 2003; 35:146–50.PubMed
27.
go back to reference Tost J, Dunker J, Gut IG. Analysis and quantification of multiple methylation variable positions in CpG islands by Pyrosequencing. Biotechniques. 2003; 35:152–6.PubMed Tost J, Dunker J, Gut IG. Analysis and quantification of multiple methylation variable positions in CpG islands by Pyrosequencing. Biotechniques. 2003; 35:152–6.PubMed
28.
go back to reference Tost J, El Abdalaoui H, Gut IG. Serial pyrosequencing for quantitative DNA methylation analysis. Biotechniques. 2006; 40:721–6.CrossRefPubMed Tost J, El Abdalaoui H, Gut IG. Serial pyrosequencing for quantitative DNA methylation analysis. Biotechniques. 2006; 40:721–6.CrossRefPubMed
29.
go back to reference Uhlmann K, Brinckmann A, Toliat MR, Ritter H, Nurnberg P. Evaluation of a potential epigenetic biomarker by quantitative methyl-single nucleotide polymorphism analysis. Electrophoresis. 2002; 23:4072–9.CrossRefPubMed Uhlmann K, Brinckmann A, Toliat MR, Ritter H, Nurnberg P. Evaluation of a potential epigenetic biomarker by quantitative methyl-single nucleotide polymorphism analysis. Electrophoresis. 2002; 23:4072–9.CrossRefPubMed
30.
go back to reference Laird PW. The power and the promise of DNA methylation markers. Natl Rev Cancer. 2003; 3:253–66.CrossRef Laird PW. The power and the promise of DNA methylation markers. Natl Rev Cancer. 2003; 3:253–66.CrossRef
Metadata
Title
CpG Methylation of Transcription Factor 4 in Gastric Carcinoma
Authors
Jae Kyoon Joo, MD, PhD
Sang Hyun Kim, MD
Ho Gun Kim, MD, PhD
Dong Yi Kim, MD, PhD
Seong Yeob Ryu, MD, PhD
Kyung Hwa Lee, MD, PhD
Jae Hyuk Lee, MD, PhD
Publication date
01-12-2010
Publisher
Springer-Verlag
Published in
Annals of Surgical Oncology / Issue 12/2010
Print ISSN: 1068-9265
Electronic ISSN: 1534-4681
DOI
https://doi.org/10.1245/s10434-010-1131-z

Other articles of this Issue 12/2010

Annals of Surgical Oncology 12/2010 Go to the issue