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01-06-2012 | Annotated Sequence Record

Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan

Authors: L. Galipienso, L. Rubio, J. Aramburu, L. Velasco, D. Janssen

Published in: Archives of Virology | Issue 6/2012

Abstract

The complete genome of a severe isolate of Cucumber vein yellowing virus (CVYV) from Jordan was sequenced. Comparison with the genome of a Spanish CVYV isolate inducing very mild symptoms in cucumber cultivars revealed a nucleotide identity of 94% for the complete genome and an amino acid identity of 96% for the coding region. Comparison of synonymous and non-synonymous substitutions suggested a negative selection at amino acid and nucleotide levels with different degrees depending on the different coding regions. Finally, specific amino acid changes in the zinc finger domain of P1b and in the P1-P3 proteolytic site were found which could be involved in the virulence of CVYV.

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Title: Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan
Authors: L. Galipienso
L. Rubio
J. Aramburu
L. Velasco
D. Janssen
Publication date: 01-06-2012
Publisher: Springer Vienna
Published in: Archives of Virology / Issue 6/2012
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-012-1264-4

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