Skip to main content
Top
Published in: BMC Public Health 1/2020

Open Access 01-12-2020 | Care | Research article

Household presentation of influenza and acute respiratory illnesses to a primary care sentinel network: retrospective database studies (2013–2018)

Authors: Simon de Lusignan, Julian Sherlock, Oluwafunmi Akinyemi, Richard Pebody, Alex Elliot, Rachel Byford, Ivelina Yonova, Maria Zambon, Mark Joy

Published in: BMC Public Health | Issue 1/2020

Login to get access

Abstract

Background

Direct observation of the household spread of influenza and respiratory infections is limited; much of our understanding comes from mathematical models. The study aims to determine household incidence of influenza-like illness (ILI), lower (LRTI) and upper (URTI) respiratory infections within a primary care routine data and identify factors associated with the diseases’ incidence.

Methods

We conducted two five-year retrospective analyses of influenza-like illness (ILI), lower (LRTI) and upper (URTI) respiratory infections using the England Royal College of General Practitioners (RCGP) Research and Surveillance Centre (RSC) primary care sentinel network database; a cross-sectional study reporting incident rate ratio (IRR) from a negative binomial model and a retrospective cohort study, using a shared gamma frailty survival model, reporting hazard ratios (HR). We reported the following household characteristics: children < 5 years old, each extra household member, gender, ethnicity (reference white), chronic disease, pregnancy, and rurality.

Results

The IRR where there was a child < 5 years were 1·62 (1·38–1·89, p < 0·0001), 2·40 (2.04–2.83, p < 0·0001) and 4·46 (3.79–5.255, p < 0·0001) for ILI, LRTI and URTI respectively. IRR also increased with household size, rurality and presentations and by female gender, compared to male. Household incidence of URTI and LRTI changed little between years whereas influenza did and were greater in years with lower vaccine effectiveness.
The HR where there was a child < 5 years were 2·34 (95%CI 1·88–2·90, p < 0·0001), 2·97 (95%CI 2·76–3·2, p < 0·0001) and 10·32 (95%CI 10.04–10.62, p < 0·0001) for ILI, LRTI and URTI respectively. HR were increased with female gender, rurality, and increasing household size.

Conclusions

Patterns of household incidence can be measured from routine data and may provide insights for the modelling of disease transmission and public health policy.
Appendix
Available only for authorised users
Literature
1.
go back to reference Riley S. Large-scale spatial-transmission models of infectious disease. Science. 2007;316(5829):1298–301.CrossRef Riley S. Large-scale spatial-transmission models of infectious disease. Science. 2007;316(5829):1298–301.CrossRef
5.
go back to reference Viboud C, Boëlle PY, Cauchemez S, Lavenu A, Valleron AJ, Flahault A, Carrat F. Risk factors of influenza transmission in households. Br J Gen Pract. 2004;54(506):684–9 PubMed PMID: 15353055; PubMed Central PMCID: PMC1326070.PubMedPubMedCentral Viboud C, Boëlle PY, Cauchemez S, Lavenu A, Valleron AJ, Flahault A, Carrat F. Risk factors of influenza transmission in households. Br J Gen Pract. 2004;54(506):684–9 PubMed PMID: 15353055; PubMed Central PMCID: PMC1326070.PubMedPubMedCentral
6.
go back to reference Tsang TK, Lau LL, Cauchemez S, Cowling BJ. Household transmission of influenza virus. Trends Microbiol. 2016;24(2):123–33.CrossRef Tsang TK, Lau LL, Cauchemez S, Cowling BJ. Household transmission of influenza virus. Trends Microbiol. 2016;24(2):123–33.CrossRef
7.
go back to reference McCaw JM, Howard PF, Richmond PC, et al. Household transmission of respiratory viruses–assessment of viral, individual and household characteristics in a population study of healthy Australian adults. BMC Infect Dis. 2012;12(1):345 Doi: 101186/1471-2334-12-345.CrossRef McCaw JM, Howard PF, Richmond PC, et al. Household transmission of respiratory viruses–assessment of viral, individual and household characteristics in a population study of healthy Australian adults. BMC Infect Dis. 2012;12(1):345 Doi: 101186/1471-2334-12-345.CrossRef
9.
go back to reference Gilca R, De Serres G, Boulianne N, Ouhoummane N, Papenburg J, Douville-Fradet M, Fortin E, Dionne M, Boivin G, Skowronski DM. Risk factors for hospitalization and severe outcomes of 2009 pandemic H1N1 influenza in Quebec, Canada. Influenza Other Respir Viruses. 2011;5(4):247–55.CrossRef Gilca R, De Serres G, Boulianne N, Ouhoummane N, Papenburg J, Douville-Fradet M, Fortin E, Dionne M, Boivin G, Skowronski DM. Risk factors for hospitalization and severe outcomes of 2009 pandemic H1N1 influenza in Quebec, Canada. Influenza Other Respir Viruses. 2011;5(4):247–55.CrossRef
11.
go back to reference Kutter JS, Spronken MI, Fraaij PL, Fouchier RA, Herfst S. Transmission routes of respiratory viruses among humans. Curr Opin Virol. 2018;28:142–51.CrossRef Kutter JS, Spronken MI, Fraaij PL, Fouchier RA, Herfst S. Transmission routes of respiratory viruses among humans. Curr Opin Virol. 2018;28:142–51.CrossRef
13.
15.
go back to reference de Lusignan S, Dorward J, Correa A, Jones N, Akinyemi O, Amirthalingam G, Andrews N, Byford R, Dabrera G, Elliot A, Ellis J, Ferreira F, Lopez Bernal J, Okusi C, Ramsay M, Sherlock J, Smith G, Williams J, Howsam G, Zambon M, Joy M, FDR H. Risk factors for SARS-CoV-2 among patients in the Oxford Royal College of General Practitioners Research and Surveillance Centre primary care network: a cross-sectional study. Lancet Infect Dis. 2020. https://doi.org/10.1016/S1473-3099(20)30371-6. de Lusignan S, Dorward J, Correa A, Jones N, Akinyemi O, Amirthalingam G, Andrews N, Byford R, Dabrera G, Elliot A, Ellis J, Ferreira F, Lopez Bernal J, Okusi C, Ramsay M, Sherlock J, Smith G, Williams J, Howsam G, Zambon M, Joy M, FDR H. Risk factors for SARS-CoV-2 among patients in the Oxford Royal College of General Practitioners Research and Surveillance Centre primary care network: a cross-sectional study. Lancet Infect Dis. 2020. https://​doi.​org/​10.​1016/​S1473-3099(20)30371-6.
16.
go back to reference Fitzner J, Qasmieh S, Mounts AW, Alexander B, Besselaar T, Briand S, Brown C, Clark S, Dueger E, Gross D, Hauge S, Hirve S, Jorgensen P, Katz MA, Mafi A, Malik M, McCarron M, Meerhoff T, Mori Y, Mott J, Olivera MTDC, Ortiz JR, Palekar R, Rebelo-de-Andrade H, Soetens L, Yahaya AA, Zhang W, Vandemaele K. Revision of clinical case definitions: influenza-like illness and severe acute respiratory infection. Bull World Health Organ. 2018;96(2):122–8. https://doi.org/10.2471/BLT.17.194514 Epub 2017 Nov 27.CrossRefPubMed Fitzner J, Qasmieh S, Mounts AW, Alexander B, Besselaar T, Briand S, Brown C, Clark S, Dueger E, Gross D, Hauge S, Hirve S, Jorgensen P, Katz MA, Mafi A, Malik M, McCarron M, Meerhoff T, Mori Y, Mott J, Olivera MTDC, Ortiz JR, Palekar R, Rebelo-de-Andrade H, Soetens L, Yahaya AA, Zhang W, Vandemaele K. Revision of clinical case definitions: influenza-like illness and severe acute respiratory infection. Bull World Health Organ. 2018;96(2):122–8. https://​doi.​org/​10.​2471/​BLT.​17.​194514 Epub 2017 Nov 27.CrossRefPubMed
17.
go back to reference de Lusignan S, Correa A, Pebody R, Yonova I, Smith G, Byford R, Pathirannehelage SR, McGee C, Elliot AJ, Hriskova M, Ferreira FI, Rafi I, Jones S. Incidence of Lower Respiratory Tract Infections and Atopic Conditions in Boys and Young Male Adults: Royal College of General Practitioners Research and Surveillance Centre Annual Report 2015–2016. JMIR Public Health Surveill. 2018;4(2):e49. https://doi.org/10.2196/publichealth.9307 PubMed PMID: 29712621; PubMedCentral PMCID: PMC5952117.CrossRefPubMedPubMedCentral de Lusignan S, Correa A, Pebody R, Yonova I, Smith G, Byford R, Pathirannehelage SR, McGee C, Elliot AJ, Hriskova M, Ferreira FI, Rafi I, Jones S. Incidence of Lower Respiratory Tract Infections and Atopic Conditions in Boys and Young Male Adults: Royal College of General Practitioners Research and Surveillance Centre Annual Report 2015–2016. JMIR Public Health Surveill. 2018;4(2):e49. https://​doi.​org/​10.​2196/​publichealth.​9307 PubMed PMID: 29712621; PubMedCentral PMCID: PMC5952117.CrossRefPubMedPubMedCentral
18.
go back to reference Pebody RG, Whitaker H, Ellis J, Andrews N, Marques DFP, Cottrell S, Reynolds AJ, Gunson R, Thompson C, Galiano M, Lackenby A, Robertson C, O'Doherty MG, Owens K, Yonova I, Shepherd SJ, Moore C, Johnston J, Donati M, McMenamin J, Lusignan S, Zambon M. End of season influenza vaccine effectiveness in primary care in adults and children in the United Kingdom in 2018/19. Vaccine. 2020;38(3):489–497. doi: https://doi.org/10.1016/j.vaccine.2019.10.071. Epub 2019 Nov 1. PubMedPMID: 31685296. Pebody RG, Whitaker H, Ellis J, Andrews N, Marques DFP, Cottrell S, Reynolds AJ, Gunson R, Thompson C, Galiano M, Lackenby A, Robertson C, O'Doherty MG, Owens K, Yonova I, Shepherd SJ, Moore C, Johnston J, Donati M, McMenamin J, Lusignan S, Zambon M. End of season influenza vaccine effectiveness in primary care in adults and children in the United Kingdom in 2018/19. Vaccine. 2020;38(3):489–497. doi: https://​doi.​org/​10.​1016/​j.​vaccine.​2019.​10.​071. Epub 2019 Nov 1. PubMedPMID: 31685296.
19.
go back to reference Pathirannehelage S, Kumarapeli P, Byford R, et al. Uptake of a dashboard designed to give Realtime feedback to a sentinel network about key data required for influenza vaccine effectiveness studies. Stud Health Technol Inform. 2018;247:161–5.PubMed Pathirannehelage S, Kumarapeli P, Byford R, et al. Uptake of a dashboard designed to give Realtime feedback to a sentinel network about key data required for influenza vaccine effectiveness studies. Stud Health Technol Inform. 2018;247:161–5.PubMed
20.
go back to reference Cameron AC, Trivedi PK. Regression-based tests for overdispersion in the Poisson model. J Econ. 1990;46(3):347–64.CrossRef Cameron AC, Trivedi PK. Regression-based tests for overdispersion in the Poisson model. J Econ. 1990;46(3):347–64.CrossRef
22.
go back to reference Bibby P, Henneberry J, Halleux JM. Under the radar?‘Soft’residential densification in England, 2001–2011. Environ Plan B Urban Analytics City Sci. 2020;47(1):102–18.CrossRef Bibby P, Henneberry J, Halleux JM. Under the radar?‘Soft’residential densification in England, 2001–2011. Environ Plan B Urban Analytics City Sci. 2020;47(1):102–18.CrossRef
28.
go back to reference Rondeau V, Filleul L, Joly P. Nested frailty models using maximum penalized likelihood estimation. Stat Med. 2006;25(23):4036–52 PubMed PMID:16463308.CrossRef Rondeau V, Filleul L, Joly P. Nested frailty models using maximum penalized likelihood estimation. Stat Med. 2006;25(23):4036–52 PubMed PMID:16463308.CrossRef
29.
go back to reference Rondeau V, Mathoulin-Pelissier S, Jacqmin-Gadda H, Brouste V, Soubeyran P. Joint frailty models for recurring events and death using maximum penalized likelihood estimation: application on cancer events. Biostatistics. 2007;8(4):708–21.CrossRef Rondeau V, Mathoulin-Pelissier S, Jacqmin-Gadda H, Brouste V, Soubeyran P. Joint frailty models for recurring events and death using maximum penalized likelihood estimation: application on cancer events. Biostatistics. 2007;8(4):708–21.CrossRef
36.
go back to reference Dabrera G, Zhao H, Andrews N, Begum F, Green H, Ellis J, Elias K, Donati M, Zambon M, Pebody R. Effectiveness of seasonal influenza vaccination during pregnancy in preventing influenza infection in infants, England, 2013/14. Euro Surveill. 2014;19(45):20959 PubMed PMID: 25411687.CrossRef Dabrera G, Zhao H, Andrews N, Begum F, Green H, Ellis J, Elias K, Donati M, Zambon M, Pebody R. Effectiveness of seasonal influenza vaccination during pregnancy in preventing influenza infection in infants, England, 2013/14. Euro Surveill. 2014;19(45):20959 PubMed PMID: 25411687.CrossRef
Metadata
Title
Household presentation of influenza and acute respiratory illnesses to a primary care sentinel network: retrospective database studies (2013–2018)
Authors
Simon de Lusignan
Julian Sherlock
Oluwafunmi Akinyemi
Richard Pebody
Alex Elliot
Rachel Byford
Ivelina Yonova
Maria Zambon
Mark Joy
Publication date
01-12-2020
Publisher
BioMed Central
Keywords
Care
Influenza
Published in
BMC Public Health / Issue 1/2020
Electronic ISSN: 1471-2458
DOI
https://doi.org/10.1186/s12889-020-09790-3

Other articles of this Issue 1/2020

BMC Public Health 1/2020 Go to the issue