Skip to main content
Top
Published in: World Journal of Urology 1/2024

Open Access 01-12-2024 | Cabozantinib | Original Article

Identification of genomic drivers for the therapeutic response of Cabozantinib in patients with metastatic renal cell carcinoma

Authors: Angelika Borkowetz, Ulrich Sommer, Gustavo Baretton, Carsten Gruellich, Björn Thorben Bürk, Holger H. H. Erb, Christian Thomas, MORECAB Consortium

Published in: World Journal of Urology | Issue 1/2024

Login to get access

Abstract

Purpose

Cabozantinib (CAB) as monotherapy or in combination with immune checkpoint inhibitors is used for systemic treatment of metastatic renal cell carcinoma (mRCC). However, little is known about predictors of treatment response to CAB. For this reason, known genomic drivers were examined to identify potential predictors of treatment response with CAB.

Methods

Twenty mRCC patients receiving monotherapy (≥ first-line) with CAB were prospectively included. DNA was extracted from archived primary tumors or metastatic tissue. Targeted DNA sequencing was performed using a gene panel including 328 genes (QIAseq Targeted DNA V3 Panel, Qiagen). The variant evaluation was performed using Varsome. The endpoints were treatment-failure-free-survival (TFFS) to CAB.

Results

26% of patients received systemic RCC treatment as the primary option. Six patients were treated with CAB in first-line (1L) and 12 patients in ≥ 2L. The median follow-up after initiation of systemic treatment was 26.7 months (mo). The PBRM1 (7 alleles), SETD2 (7 alleles), VHL (11 alleles), and CHEK2 (14 alleles) genes were most frequently altered. The median time to TFFS was 10.5 mo (95% confidence interval (CI) 6.2–14.7 mo). There was a longer treatment response to CAB in patients with alterations of the SETD2 gene (SETD2 alteration median TFFS not reached vs. no SETD2 alterations 8.4 mo (95% CI 5.2–11.6 mo); p = 0.024).

Conclusion

Pathogenic variant genes may indicate treatment response to systemic therapy in mRCC. Patients with alterations of the SETD2 gene show longer responses to CAB treatment.
Appendix
Available only for authorised users
Literature
1.
go back to reference Siegel RL, Miller KD, Fuchs HE, Jemal A (2022) Cancer statistics, 2022. CA Cancer J Clin 72(1):7–33CrossRefPubMed Siegel RL, Miller KD, Fuchs HE, Jemal A (2022) Cancer statistics, 2022. CA Cancer J Clin 72(1):7–33CrossRefPubMed
2.
go back to reference Ljungberg B, Albiges L, Abu-Ghanem Y, Bedke J, Capitanio U, Dabestani S et al (2022) European Association of Urology Guidelines on renal cell carcinoma: The 2022 update. Eur Urol 82(4):399–410CrossRefPubMed Ljungberg B, Albiges L, Abu-Ghanem Y, Bedke J, Capitanio U, Dabestani S et al (2022) European Association of Urology Guidelines on renal cell carcinoma: The 2022 update. Eur Urol 82(4):399–410CrossRefPubMed
3.
go back to reference Yakes FM, Chen J, Tan J, Yamaguchi K, Shi Y, Yu P et al (2011) Cabozantinib (XL184), a novel MET and VEGFR2 inhibitor, simultaneously suppresses metastasis, angiogenesis, and tumor growth. Mol Cancer Ther 10(12):2298–2308CrossRefPubMed Yakes FM, Chen J, Tan J, Yamaguchi K, Shi Y, Yu P et al (2011) Cabozantinib (XL184), a novel MET and VEGFR2 inhibitor, simultaneously suppresses metastasis, angiogenesis, and tumor growth. Mol Cancer Ther 10(12):2298–2308CrossRefPubMed
4.
go back to reference Choueiri TK, Halabi S, Sanford BL, Hahn O, Michaelson MD, Walsh MK et al (2017) Cabozantinib versus sunitinib as initial targeted therapy for patients with metastatic renal cell carcinoma of poor or intermediate risk: The alliance A031203 CABOSUN trial. J Clin Oncol 35(6):591–597CrossRefPubMed Choueiri TK, Halabi S, Sanford BL, Hahn O, Michaelson MD, Walsh MK et al (2017) Cabozantinib versus sunitinib as initial targeted therapy for patients with metastatic renal cell carcinoma of poor or intermediate risk: The alliance A031203 CABOSUN trial. J Clin Oncol 35(6):591–597CrossRefPubMed
5.
go back to reference Choueiri TK, Powles T, Burotto M, Escudier B, Bourlon MT, Zurawski B et al (2021) Nivolumab plus cabozantinib versus sunitinib for advanced renal-cell carcinoma. N Engl J Med 384(9):829–841CrossRefPubMedPubMedCentral Choueiri TK, Powles T, Burotto M, Escudier B, Bourlon MT, Zurawski B et al (2021) Nivolumab plus cabozantinib versus sunitinib for advanced renal-cell carcinoma. N Engl J Med 384(9):829–841CrossRefPubMedPubMedCentral
6.
go back to reference Choueiri TK, Escudier B, Powles T, Mainwaring PN, Rini BI, Donskov F et al (2015) Cabozantinib versus everolimus in advanced renal-cell carcinoma. N Engl J Med 373(19):1814–1823CrossRefPubMedPubMedCentral Choueiri TK, Escudier B, Powles T, Mainwaring PN, Rini BI, Donskov F et al (2015) Cabozantinib versus everolimus in advanced renal-cell carcinoma. N Engl J Med 373(19):1814–1823CrossRefPubMedPubMedCentral
7.
go back to reference Pal SK, Albiges L, Tomczak P, Suarez C, Voss MH, de Velasco G et al (2023) Atezolizumab plus cabozantinib versus cabozantinib monotherapy for patients with renal cell carcinoma after progression with previous immune checkpoint inhibitor treatment (CONTACT-03): a multicentre, randomised, open-label, phase 3 trial. Lancet 402(10397):185–195CrossRefPubMed Pal SK, Albiges L, Tomczak P, Suarez C, Voss MH, de Velasco G et al (2023) Atezolizumab plus cabozantinib versus cabozantinib monotherapy for patients with renal cell carcinoma after progression with previous immune checkpoint inhibitor treatment (CONTACT-03): a multicentre, randomised, open-label, phase 3 trial. Lancet 402(10397):185–195CrossRefPubMed
8.
go back to reference Navani V, Wells JC, Boyne DJ, Cheung WY, Brenner DM, McGregor BA, et al. (2023) CABOSEQ: The effectiveness of cabozantinib in patients with treatment refractory advanced renal cell carcinoma: results from the International Metastatic Renal Cell Carcinoma Database Consortium (IMDC). Clin Genitourin Cancer 21(1):106 e1–e8 Navani V, Wells JC, Boyne DJ, Cheung WY, Brenner DM, McGregor BA, et al. (2023) CABOSEQ: The effectiveness of cabozantinib in patients with treatment refractory advanced renal cell carcinoma: results from the International Metastatic Renal Cell Carcinoma Database Consortium (IMDC). Clin Genitourin Cancer 21(1):106 e1–e8
9.
go back to reference Albiges L, Schmidinger M, Taguieva-Pioger N, Perol D, Grunwald V, Guemas E (2022) CaboPoint: a phase II study of cabozantinib as second-line treatment in patients with metastatic renal cell carcinoma. Future Oncol 18(8):915–926CrossRefPubMed Albiges L, Schmidinger M, Taguieva-Pioger N, Perol D, Grunwald V, Guemas E (2022) CaboPoint: a phase II study of cabozantinib as second-line treatment in patients with metastatic renal cell carcinoma. Future Oncol 18(8):915–926CrossRefPubMed
10.
go back to reference Bui TO, Dao VT, Nguyen VT, Feugeas JP, Pamoukdjian F, Bousquet G (2022) Genomics of clear-cell renal cell carcinoma: a systematic review and meta-analysis. Eur Urol 81(4):349–361CrossRefPubMed Bui TO, Dao VT, Nguyen VT, Feugeas JP, Pamoukdjian F, Bousquet G (2022) Genomics of clear-cell renal cell carcinoma: a systematic review and meta-analysis. Eur Urol 81(4):349–361CrossRefPubMed
11.
go back to reference Carril-Ajuria L, Santos M, Roldan-Romero JM, Rodriguez-Antona C, de Velasco G (2019) Prognostic and predictive value of PBRM1 in clear cell renal cell carcinoma. Cancers (Basel). 12(1):16CrossRefPubMedPubMedCentral Carril-Ajuria L, Santos M, Roldan-Romero JM, Rodriguez-Antona C, de Velasco G (2019) Prognostic and predictive value of PBRM1 in clear cell renal cell carcinoma. Cancers (Basel). 12(1):16CrossRefPubMedPubMedCentral
12.
go back to reference Mayakonda A, Lin DC, Assenov Y, Plass C, Koeffler HP (2018) Maftools: efficient and comprehensive analysis of somatic variants in cancer. Genome Res 28(11):1747–1756CrossRefPubMedPubMedCentral Mayakonda A, Lin DC, Assenov Y, Plass C, Koeffler HP (2018) Maftools: efficient and comprehensive analysis of somatic variants in cancer. Genome Res 28(11):1747–1756CrossRefPubMedPubMedCentral
13.
go back to reference Gan CL, Dudani S, Wells JC, Donskov F, Pal SK, Dizman N et al (2021) Cabozantinib real-world effectiveness in the first-through fourth-line settings for the treatment of metastatic renal cell carcinoma: results from the international metastatic renal cell carcinoma database consortium. Cancer Med 10(4):1212–1221CrossRefPubMedPubMedCentral Gan CL, Dudani S, Wells JC, Donskov F, Pal SK, Dizman N et al (2021) Cabozantinib real-world effectiveness in the first-through fourth-line settings for the treatment of metastatic renal cell carcinoma: results from the international metastatic renal cell carcinoma database consortium. Cancer Med 10(4):1212–1221CrossRefPubMedPubMedCentral
14.
go back to reference Vano YA, Phan L, Gravis G, Korakis I, Schlurmann F, Maillet D et al (2022) Cabozantinib-nivolumab sequence in metastatic renal cell carcinoma: The CABIR study. Int J Cancer 151(8):1335–1344CrossRefPubMedPubMedCentral Vano YA, Phan L, Gravis G, Korakis I, Schlurmann F, Maillet D et al (2022) Cabozantinib-nivolumab sequence in metastatic renal cell carcinoma: The CABIR study. Int J Cancer 151(8):1335–1344CrossRefPubMedPubMedCentral
15.
go back to reference Flaifel A, Xie W, Braun DA, Ficial M, Bakouny Z, Nassar AH et al (2019) PD-L1 expression and clinical outcomes to cabozantinib, everolimus, and sunitinib in patients with metastatic renal cell carcinoma: analysis of the randomized clinical trials METEOR and CABOSUN. Clin Cancer Res 25(20):6080–6088CrossRefPubMedPubMedCentral Flaifel A, Xie W, Braun DA, Ficial M, Bakouny Z, Nassar AH et al (2019) PD-L1 expression and clinical outcomes to cabozantinib, everolimus, and sunitinib in patients with metastatic renal cell carcinoma: analysis of the randomized clinical trials METEOR and CABOSUN. Clin Cancer Res 25(20):6080–6088CrossRefPubMedPubMedCentral
16.
go back to reference Hakozaki K, Tanaka N, Takamatsu K, Takahashi R, Yasumizu Y, Mikami S et al (2021) Landscape of prognostic signatures and immunogenomics of the AXL/GAS6 axis in renal cell carcinoma. Br J Cancer 125(11):1533–1543CrossRefPubMedPubMedCentral Hakozaki K, Tanaka N, Takamatsu K, Takahashi R, Yasumizu Y, Mikami S et al (2021) Landscape of prognostic signatures and immunogenomics of the AXL/GAS6 axis in renal cell carcinoma. Br J Cancer 125(11):1533–1543CrossRefPubMedPubMedCentral
17.
18.
go back to reference Gabriel N, Dahiya S, Wang X, Goldstein M (2020) Abstract 1249: SetD2 histone methyltransferase mutation status predicts treatment response in glioblastoma: Strategies to overcome chemoresistance. Cancer Res 80(16_Supplement):1249 Gabriel N, Dahiya S, Wang X, Goldstein M (2020) Abstract 1249: SetD2 histone methyltransferase mutation status predicts treatment response in glioblastoma: Strategies to overcome chemoresistance. Cancer Res 80(16_Supplement):1249
19.
go back to reference Dong Y, Zhao X, Feng X, Zhou Y, Yan X, Zhang Y et al (2019) SETD2 mutations confer chemoresistance in acute myeloid leukemia partly through altered cell cycle checkpoints. Leukemia 33(11):2585–2598CrossRefPubMedPubMedCentral Dong Y, Zhao X, Feng X, Zhou Y, Yan X, Zhang Y et al (2019) SETD2 mutations confer chemoresistance in acute myeloid leukemia partly through altered cell cycle checkpoints. Leukemia 33(11):2585–2598CrossRefPubMedPubMedCentral
20.
go back to reference Sheng Y, Ji Z, Zhao H, Wang J, Cheng C, Xu W et al (2019) Downregulation of the histone methyltransferase SETD2 promotes imatinib resistance in chronic myeloid leukaemia cells. Cell Prolif 52(4):e12611CrossRefPubMedPubMedCentral Sheng Y, Ji Z, Zhao H, Wang J, Cheng C, Xu W et al (2019) Downregulation of the histone methyltransferase SETD2 promotes imatinib resistance in chronic myeloid leukaemia cells. Cell Prolif 52(4):e12611CrossRefPubMedPubMedCentral
21.
go back to reference Li L, Miao W, Huang M, Williams P, Wang Y (2019) Integrated genomic and proteomic analyses reveal novel mechanisms of the methyltransferase SETD2 in renal cell carcinoma development. Mol Cell Proteom 18(3):437–447CrossRef Li L, Miao W, Huang M, Williams P, Wang Y (2019) Integrated genomic and proteomic analyses reveal novel mechanisms of the methyltransferase SETD2 in renal cell carcinoma development. Mol Cell Proteom 18(3):437–447CrossRef
22.
go back to reference Santos VE, da Costa WH, Bezerra SM, da Cunha IW, Nobre JQC, Brazao ES Jr et al (2021) Prognostic impact of loss of SETD2 in clear cell renal cell carcinoma. Clin Genitourin Cancer 19(4):339–345CrossRefPubMed Santos VE, da Costa WH, Bezerra SM, da Cunha IW, Nobre JQC, Brazao ES Jr et al (2021) Prognostic impact of loss of SETD2 in clear cell renal cell carcinoma. Clin Genitourin Cancer 19(4):339–345CrossRefPubMed
23.
go back to reference Lee CH, Voss MH, Carlo MI, Chen YB, Zucker M, Knezevic A et al (2022) Phase II trial of cabozantinib plus nivolumab in patients with non-clear-cell renal cell carcinoma and genomic correlates. J Clin Oncol 40(21):2333–2341CrossRefPubMedPubMedCentral Lee CH, Voss MH, Carlo MI, Chen YB, Zucker M, Knezevic A et al (2022) Phase II trial of cabozantinib plus nivolumab in patients with non-clear-cell renal cell carcinoma and genomic correlates. J Clin Oncol 40(21):2333–2341CrossRefPubMedPubMedCentral
24.
go back to reference Elgendy M, Fusco JP, Segura V, Lozano MD, Minucci S, Echeveste JI et al (2019) Identification of mutations associated with acquired resistance to sunitinib in renal cell cancer. Int J Cancer 145(7):1991–2001CrossRefPubMed Elgendy M, Fusco JP, Segura V, Lozano MD, Minucci S, Echeveste JI et al (2019) Identification of mutations associated with acquired resistance to sunitinib in renal cell cancer. Int J Cancer 145(7):1991–2001CrossRefPubMed
Metadata
Title
Identification of genomic drivers for the therapeutic response of Cabozantinib in patients with metastatic renal cell carcinoma
Authors
Angelika Borkowetz
Ulrich Sommer
Gustavo Baretton
Carsten Gruellich
Björn Thorben Bürk
Holger H. H. Erb
Christian Thomas
MORECAB Consortium
Publication date
01-12-2024
Publisher
Springer Berlin Heidelberg
Published in
World Journal of Urology / Issue 1/2024
Print ISSN: 0724-4983
Electronic ISSN: 1433-8726
DOI
https://doi.org/10.1007/s00345-024-04783-y

Other articles of this Issue 1/2024

World Journal of Urology 1/2024 Go to the issue