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Published in: European Radiology 7/2022

29-01-2022 | Artificial Intelligence | Imaging Informatics and Artificial Intelligence

Dynamic 3D radiomics analysis using artificial intelligence to assess the stage of COVID-19 on CT images

Authors: Shengping Cai, Yang Chen, Shixuan Zhao, Dehuai He, Yongjie Li, Nian Xiong, Zhidan Li, Shaoping Hu

Published in: European Radiology | Issue 7/2022

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Abstract

Objective

To develop a dynamic 3D radiomics analysis method using artificial intelligence technique for automatically assessing four disease stages (i.e., early, progressive, peak, and absorption stages) of COVID-19 patients on CT images.

Methods

The dynamic 3D radiomics analysis method was composed of three AI algorithms (the lung segmentation, lesion segmentation, and stage-assessing AI algorithms) that were trained and tested on 313,767 CT images from 520 COVID-19 patients. This proposed method used 3D lung lesion that was segmented by the lung and lesion segmentation algorithms to extract radiomics features, and then combined with clinical metadata to assess the possible stage of COVID-19 patients using stage-assessing algorithm. Area under the receiver operating characteristic curve (AUC), accuracy, sensitivity, and specificity were used to evaluate diagnostic performance.

Results

Of 520 patients, 66 patients (mean age, 57 years ± 15 [standard deviation]; 35 women), including 203 CT scans, were tested. The dynamic 3D radiomics analysis method used 30 features, including 27 radiomics features and 3 clinical features to assess the possible disease stage of COVID-19 with an accuracy of 90%. For the prediction of each stage, the AUC of stage 1 was 0.965 (95% CI: 0.934, 0.997), AUC of stage 2 was 0.958 (95% CI: 0.931, 0.984), AUC of stage 3 was 0.998 (95% CI: 0.994, 1.000), and AUC of stage 4 was 0.975 (95% CI: 0.956, 0.994).

Conclusion

With high diagnostic performance, the dynamic 3D radiomics analysis using artificial intelligence could represent a potential tool for helping hospitals make appropriate resource allocations and follow-up of treatment response.

Key Points

• The AI segmentation algorithms were able to accurately segment the lung and lesion of COVID-19 patients of different stages.
• The dynamic 3D radiomics analysis method successfully extracted the radiomics features from the 3D lung lesion.
• The stage-assessing AI algorithm combining with clinical metadata was able to assess the four stages with an accuracy of 90%, a macro-average AUC of 0.975.
Appendix
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Literature
2.
go back to reference Fang Y, Zhang H, Xie J et al (2020) Sensitivity of chest CT for COVID-19: comparison to RT-PCR. Radiology 296:E115–E117CrossRef Fang Y, Zhang H, Xie J et al (2020) Sensitivity of chest CT for COVID-19: comparison to RT-PCR. Radiology 296:E115–E117CrossRef
3.
go back to reference Kim JY, Choe PG, Oh Y et al (2020) The first case of 2019 novel coronavirus pneumonia imported into Korea from Wuhan, China: implication for infection prevention and control measures. J Korean Med Sci 35:e61CrossRef Kim JY, Choe PG, Oh Y et al (2020) The first case of 2019 novel coronavirus pneumonia imported into Korea from Wuhan, China: implication for infection prevention and control measures. J Korean Med Sci 35:e61CrossRef
5.
go back to reference Pan F, Ye T, Sun P et al (2020) Time course of lung changes at chest CT during recovery from coronavirus disease 2019 (COVID-19). Radiology 295:715–721CrossRef Pan F, Ye T, Sun P et al (2020) Time course of lung changes at chest CT during recovery from coronavirus disease 2019 (COVID-19). Radiology 295:715–721CrossRef
6.
go back to reference Ma J, Wang Y, An X et al (2020) Towards efficient COVID-19 CT annotation: a benchmark for lung and infection segmentation. arXiv preprint arXiv:200412537 Ma J, Wang Y, An X et al (2020) Towards efficient COVID-19 CT annotation: a benchmark for lung and infection segmentation. arXiv preprint arXiv:200412537
7.
go back to reference Zhang K, Liu X, Shen J et al (2020) Clinically applicable AI system for accurate diagnosis, quantitative measurements, and prognosis of COVID-19 pneumonia using computed tomography. Cell 181(1423–1433):e1411 Zhang K, Liu X, Shen J et al (2020) Clinically applicable AI system for accurate diagnosis, quantitative measurements, and prognosis of COVID-19 pneumonia using computed tomography. Cell 181(1423–1433):e1411
9.
go back to reference Li H, Liu S, Xu H, Cheng J (2020) Guideline for medical imaging in auxiliary diagnosis of coronavirus disease 2019. Chin J Med Imaging Technol 36:321–331 Li H, Liu S, Xu H, Cheng J (2020) Guideline for medical imaging in auxiliary diagnosis of coronavirus disease 2019. Chin J Med Imaging Technol 36:321–331
10.
go back to reference Aerts HJWL, Velazquez ER, Leijenaar RTH et al (2014) Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach. Nat Commun 5:4006CrossRef Aerts HJWL, Velazquez ER, Leijenaar RTH et al (2014) Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach. Nat Commun 5:4006CrossRef
11.
go back to reference Sylvester EV, Bentzen P, Bradbury IR et al (2018) Applications of random forest feature selection for fine-scale genetic population assignment. Evol Appl 11:153–165CrossRef Sylvester EV, Bentzen P, Bradbury IR et al (2018) Applications of random forest feature selection for fine-scale genetic population assignment. Evol Appl 11:153–165CrossRef
13.
go back to reference Zeng H, Cheung Y-m (2010) Feature selection and kernel learning for local learning-based clustering. IEEE Trans Pattern Anal Mach Intell 33:1532–1547CrossRef Zeng H, Cheung Y-m (2010) Feature selection and kernel learning for local learning-based clustering. IEEE Trans Pattern Anal Mach Intell 33:1532–1547CrossRef
14.
go back to reference Zhu J, Ji P, Pang J et al (2020) Clinical characteristics of 3062 COVID-19 patients: a meta-analysis. J Med Virol 92:1902–1914CrossRef Zhu J, Ji P, Pang J et al (2020) Clinical characteristics of 3062 COVID-19 patients: a meta-analysis. J Med Virol 92:1902–1914CrossRef
16.
go back to reference Liu F, Li L, Xu M et al (2020) Prognostic value of interleukin-6, C-reactive protein, and procalcitonin in patients with COVID-19. J Clin Virol 104370 Liu F, Li L, Xu M et al (2020) Prognostic value of interleukin-6, C-reactive protein, and procalcitonin in patients with COVID-19. J Clin Virol 104370
17.
go back to reference Han Y, Zhang H, Mu S et al (2020) Lactate dehydrogenase, an independent risk factor of severe COVID-19 patients: a retrospective and observational study. Aging (Albany NY) 12:11245CrossRef Han Y, Zhang H, Mu S et al (2020) Lactate dehydrogenase, an independent risk factor of severe COVID-19 patients: a retrospective and observational study. Aging (Albany NY) 12:11245CrossRef
18.
go back to reference Wu M-y, Yao L, Wang Y et al (2020) Clinical evaluation of potential usefulness of serum lactate dehydrogenase (LDH) in 2019 novel coronavirus (COVID-19) pneumonia. Respir Res 21:1–6CrossRef Wu M-y, Yao L, Wang Y et al (2020) Clinical evaluation of potential usefulness of serum lactate dehydrogenase (LDH) in 2019 novel coronavirus (COVID-19) pneumonia. Respir Res 21:1–6CrossRef
19.
go back to reference Chen C, Yan J, Zhou N, Zhao J, Wang D (2020) Analysis of myocardial injury in patients with COVID-19 and association between concomitant cardiovascular diseases and severity of COVID-19. Zhonghua Xin Xue Guan Bing Za Zhi 48:E008–E008 Chen C, Yan J, Zhou N, Zhao J, Wang D (2020) Analysis of myocardial injury in patients with COVID-19 and association between concomitant cardiovascular diseases and severity of COVID-19. Zhonghua Xin Xue Guan Bing Za Zhi 48:E008–E008
20.
go back to reference Cheng Y, Luo R, Wang K et al (2020) Kidney disease is associated with in-hospital death of patients with COVID-19. Kidney Int 97:829–838CrossRef Cheng Y, Luo R, Wang K et al (2020) Kidney disease is associated with in-hospital death of patients with COVID-19. Kidney Int 97:829–838CrossRef
21.
go back to reference Guan Y, Peck KK, Lyo J et al (2020) T1-weighted dynamic contrast-enhanced MRI to differentiate nonneoplastic and malignant vertebral body lesions in the spine. Radiology 297:382–389CrossRef Guan Y, Peck KK, Lyo J et al (2020) T1-weighted dynamic contrast-enhanced MRI to differentiate nonneoplastic and malignant vertebral body lesions in the spine. Radiology 297:382–389CrossRef
22.
go back to reference Klein SL, Pekosz A, Park H-S et al (2020) Sex, age, and hospitalization drive antibody responses in a COVID-19 convalescent plasma donor population. J Clin Investig 130:6141–6150CrossRef Klein SL, Pekosz A, Park H-S et al (2020) Sex, age, and hospitalization drive antibody responses in a COVID-19 convalescent plasma donor population. J Clin Investig 130:6141–6150CrossRef
23.
go back to reference Palaiodimos L, Kokkinidis DG, Li W et al (2020) Severe obesity, increasing age and male sex are independently associated with worse in-hospital outcomes, and higher in-hospital mortality, in a cohort of patients with COVID-19 in the Bronx New York. Metabolism 108:154262CrossRef Palaiodimos L, Kokkinidis DG, Li W et al (2020) Severe obesity, increasing age and male sex are independently associated with worse in-hospital outcomes, and higher in-hospital mortality, in a cohort of patients with COVID-19 in the Bronx New York. Metabolism 108:154262CrossRef
24.
go back to reference Iaccarino G, Grassi G, Borghi C, Ferri C, Salvetti M, Volpe M (2020) Age and multimorbidity predict death among COVID-19 patients: results of the SARS-RAS study of the Italian Society of hypertension. Hypertension 76:366–372CrossRef Iaccarino G, Grassi G, Borghi C, Ferri C, Salvetti M, Volpe M (2020) Age and multimorbidity predict death among COVID-19 patients: results of the SARS-RAS study of the Italian Society of hypertension. Hypertension 76:366–372CrossRef
25.
go back to reference Homayounieh F, Ebrahimian S, Babaei R et al (2020) CT radiomics, radiologists and clinical information in predicting outcome of patients with COVID-19 pneumonia. Radiol Cardiothorac Imaging 2:e200322CrossRef Homayounieh F, Ebrahimian S, Babaei R et al (2020) CT radiomics, radiologists and clinical information in predicting outcome of patients with COVID-19 pneumonia. Radiol Cardiothorac Imaging 2:e200322CrossRef
26.
go back to reference Moons KGM, Wolff RF, Riley RD et al (2019) PROBAST: a tool to assess risk of bias and applicability of prediction model studies: explanation and elaboration. Ann Intern Med 170:W1–W33CrossRef Moons KGM, Wolff RF, Riley RD et al (2019) PROBAST: a tool to assess risk of bias and applicability of prediction model studies: explanation and elaboration. Ann Intern Med 170:W1–W33CrossRef
Metadata
Title
Dynamic 3D radiomics analysis using artificial intelligence to assess the stage of COVID-19 on CT images
Authors
Shengping Cai
Yang Chen
Shixuan Zhao
Dehuai He
Yongjie Li
Nian Xiong
Zhidan Li
Shaoping Hu
Publication date
29-01-2022
Publisher
Springer Berlin Heidelberg
Published in
European Radiology / Issue 7/2022
Print ISSN: 0938-7994
Electronic ISSN: 1432-1084
DOI
https://doi.org/10.1007/s00330-021-08533-1

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