Abstract
Human phagocyte-specific chitotriosidase (CHIT-1) is a chitinolytic enzyme associated with several diseases involving macrophage activation. Previous studies have demonstrated that a high activity of Chit could have widespread effects on atherosclerosis, cardiovascular disease and dementia. The 24-bp duplication in the CHIT-1 gene is associated with a deficiency in enzymatic activity. In this study, we attempted to assess whether CHIT-1 could be a plausible candidate gene responsible for human longevity. Therefore, we compared the distribution of the CHIT-1 polymorphism genotype in three different populations of the Mediterranean area (Italian, Greek and Tunisian) aged over 90 years. As a control group for each nonagenarian and centenarian, a 60–70-year-old subject was genotyped. We found that the heterozygote frequency for the 24-bp duplication in the CHIT-1 gene was not significantly different among the oldest old subjects of Mediterranean populations, whereas it was significantly different between oldest old subjects and control subjects, being highest among the oldest old subjects and lowest among control groups. In the oldest old group, no subject was observed to be homozygous for CHIT-1 deficiency. Moreover, the mean enzymatic activity in heterozygous oldest subjects was lower than that in the control group. These data indicate that the heterozygosis for a 24-bp duplication in the CHIT-1 gene could have a protective effect in human longevity.
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Introduction
Nonagenarians and centenarians comprise a small proportion of the whole population. This group because it survives to an extremely old age, continues to capture the interest of the medical and scientific community. An understandable reason for this interest is the hope to discover the factors allowing certain people to survive and advance greatly in age, whereas others do not. Demographic, clinical, biomedical and genetic data of centenarians could provide some evidence with regard to the factors related to exceptional longevity.1 Nongenetic factors including diet, physical activity, health habits and psychosocial factors are important. Moreover, a number of studies suggest that about 25% of the variation in human lifespan in average-lived populations can be explained by genetic factors, but in populations with larger numbers of extraordinary survivors, the genetic contribution to lifespan may be higher.2 Substantial interest has developed over past few years in identifying genes that are associated with longevity in humans. Nevertheless, studies on candidate ‘longevity-associated’ genes in humans, referred to as ‘longevity genes,’ have generally been limited.
Human chitotriosidase (CHIT-1) is a member of the chitinase family, a group of glycoside hydrolases that cleave chitin. Chitin is a polysaccharide present as a structural component in fungi, nematodes and insects.3, 4 The human CHIT-1 gene is localized on chromosome 1q31–q32.5 CHIT-1 is present in normal plasma and is mainly secreted by activated macrophages and to a lesser degree by neutrophils.6 Chit activity has been proposed as a biochemical marker of macrophage accumulation and activity in several lysosomal lipid storage diseases.7, 8, 9, 10 Little is known regarding the physiological function of CHIT-1, although its phagocyte-specific expression points to a role of the enzyme in innate immunity.11, 12 CHIT-1 mRNA expression is upregulated after stimulation by tumor necrosis factor alpha (TNF-α), interferon gamma (IFN-γ), prolactin and lipopolysaccharide (LPS).13, 14, 15 In vitro studies using recombinant human CHIT-1 have demonstrated that CHIT-1 lyses the hyphal tip of Mucor rouxii and inhibits the growth of hyphae of Candida albicans.6 In vivo, neutropenic mice challenged with lethal doses of C. albicans or with Aspergillosis exhibit increased survival when treated with human recombinant CHIT-1.6 A 24-bp duplication in exon 10 in the CHIT-1 gene activates a cryptic 39 splice site in the same exon, generating an abnormally spliced mRNA with an in-frame deletion of 87 nucleotides. The spliced mRNA encodes an enzymatically inactive protein that lacks an internal stretch of 29 amino acids.5 The resulting phenotype is an asymptomatic Chit activity deficiency. A mild enzymatic activity has been detected in subjects heterozygous for the duplication.16, 17
Chit activity seems to be related to the severity of atherosclerotic lesions, thereby suggesting a possible role for Chit as a marker of atherosclerotic extension.18, 19, 20 In addition, it was reported that patients with atherothrombotic stroke (ATS) and ischemic disease (IHD) had significantly higher Chit activities than the control group.19 However, ATS subjects had higher Chit activity than IHD subjects, whose atherosclerosis is localized more specifically in coronary vessels. This was confirmed by the observation that in the ATS group, Chit activity was related to carotid stenosis, in accordance with a clinical picture featured by a more widespread atherosclerosis.19 In addition, the increase in serum Chit activity was found to be age dependent. This phenomenon could be explained by the ongoing accumulation of lipid-laden macrophages during the gradual progression of atherosclerosis in relation to age. Inflammation has a central role in the beginning of the atherosclerosis process and in the mechanism underlying the development and progression of atherosclerosis complications, plaque rupture and subsequent thrombosis.21, 22 Macrophages are present in all phases of atherogenesis and are markers of atherosclerotic plaque formation.23 Macrophage accumulation, localized in supra-aortic and coronary vessels, is associated with increased serum Chit activity, which reflects the state of activation of macrophages within atherosclerotic lesions.18 Interestingly, other investigations have suggested that Chit could have a crucial role even in pathological conditions, such as coronary artery disease,24 acute ischemic stroke,25 cerebrovascular dementia (CVD) and Alzheimer's disease (AD).26, 27 Recently, it has been shown that CHIT-1 may be involved in the progression of nonalcoholic steatohepatitis.28, 29 Overall, these data underline the idea that CHIT-1, as an important factor in inflammation,15 could have widespread effects on aging phenotypes, particularly on cardiovascular disease and dementia, and as such may influence the ability to achieve a long and healthy life. In a study conducted on healthy elderly subjects (aged 65–94 years), it has been reported that levels of serum CHIT was higher compared with that in young people.30 However, to date and to the best of our knowledge, there is no information on the association between single-nucleotide polymorphisms (SNPs) in CHIT-1 gene and longevity. The aim of this study was to determine whether common, natural variations in the form of SNPs in the CHIT-1 gene might influence human aging and longevity.
Materials and methods
Subjects
This study was carried out between 2003 and 2008. From the time of recruitment, the groups included the following:
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A total of 50 Italian subjects: 15 male and 35 female, aged 90–102 years (average age: 96 years), and 50 unrelated volunteers (average age: 66 years), who presented themselves at the Department of Senescence, Urological and Neurological Sciences, Catania University Hospital, Catania, Italy. The date of birth of each subject was checked by matching information from the social security document, and by the testimony of a first-degree relative.
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A total of 33 Tunisian subjects: 9 male and 24 female, aged 90–100 years (average age: 94 years), were recruited from Tunis, Hammamet, Monastir, Sousse, Mahadia, Sidi Bou Said, Djerba, Kairouen, Carthage, Bizerte, Gabes, El Jem, Le Grand Soud, Tozeur, at their home, using the archival records in the City Hall.
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A total of 46 Greek subjects: 22 male and 24 female, aged 92–101 years (average: 96.8 years), were recruited from different regions of Greece (Attica, Greek Macedonia, Thessalia, Epirus and Peloponnese), at their home. Nonagenarians and centenarians were identified by researching archival records in the City Hall and/or church registries.
For each nonagenarian and centenarian, a 60–70-year-old control of the same gender was randomly selected from the inhabitants of the same city of the province. This age group control was chosen on the basis of the consideration that at this age both men and women have less than a 1% probability of becoming centenarians.27 Patients with malignant, inflammatory diseases or C-reactive protein levels >20 were excluded from all study groups. Controls living in the same municipality were excluded to avoid excessive consanguinity. Written informed consent was obtained from all study participants or from family representatives if participants were unable to provide consent. Blood specimens were collected in sterile tripotassium-EDTA tubes and immediately stored at −70°C. Genomic DNA was stored at −20°C for different genetic analyses.
DNA analysis
Genomic DNA was isolated from 5 ml of peripheral blood as previously described.14 In total, 30 ng of DNA was used as a template in subsequent PCR reactions. The duplication mutation analysis was performed using specific CHIT-1 primers: 5′-AGCTATCTGAAGCAGAAG-3′ and 5′-GGAGAAGCCGGCAAAGTC-3′. Fragments of 75 and 99 bp were amplified from normal and mutant Chit genes, respectively. The DNA was denatured at 95 °C for 4 min for 1 cycle and amplified at 95 °C for 1 min, 60 °C for 30 s and at 72 °C for 30 s for 35 cycles. The amplified DNA was separated on an 8% acrylamide/0.5 × Tris borate EDTA (TBE) gel and visualized by ethidium bromide staining. Electrophoresis in MetaPhor gel (4%) allowed the detection of all fragments. A mixture of both fragments was detected in heterozygous subjects. Amplification was performed using the conditions described above.
Chit activity
Chit activity determination was performed as previously described.17 A volume of 5 ml of undiluted plasma was incubated with 100 ml of a solution containing 22 mmoll−l of the artificial substrate 4-methylumbelliferylb-D-N,N0,N00triacetylchitotriose (Sigma, Milan, Italy) in 0.5 M citrate-phosphate buffer (pH 5.2) for 15 min at 37 °C. The reaction was stopped using 2 ml of 0.5 mol l−1 Na2CO3–NaHCO3 buffer (pH 10.7). Fluorescence was read using a Perkin-Elmer fluorimeter, on 365-nm excitation and 450-nm emission. Chit activity was measured as nanomoles of substrate hydrolyzed per ml per hour (nmol ml−1 h−1). The plasma Chit was expressed as nmol ml−1 h−1. Samples with Chit levels 411 nmol ml−1 h−1 were assayed after a 10- or 50-fold dilution with distilled water.
Statistical analysis
SNPs were evaluated for deviation from Hardy–Weinberg equilibrium. General linear model and analysis of covariance were used to compare the proportion of healthy study participants through CHIT-1 genotype. For the analysis of aging phenotypes in case and controls, Student's t-test was used for analysis and distribution of plasma Chit activity values. Data are expressed as mean±s.d. Significance was assessed by one-way analysis of variance (ANOVA) and Student's t-test. P<0.05 was considered to be statistically significant.
Results
A total of 258 90-year-old and 60-year-old subjects were genotyped. Table 1 shows the baseline characteristic of each subject, in which biological characteristics, general health status, disease prevalence and functional status are presented. In terms of biological characteristics, the long-living subjects were older, leaner (lower waist/hip ratio) and had lower triglyceride and glucose levels. These subjects also had better self-rated health and lower prevalence of cardiovascular disease (coronary heart disease (CHD) and stroke) and degenerative disease. Functionally, they seemed better able to walk, but had lower grip strength. There was no difference in the cognitive score between long-living and control subjects.
No homozygous 24-bp duplication subject was found among the nonagenarian and centenarian population from the different Mediterranean areas. The absence of homozygous individuals in the very old group deviates significantly from the expectations of Hardy–Weinberg equilibrium. In the oldest group, the frequency of this mutant allele was 72.7, 80.03 and 78.4% in Tunisian, Greek and Italian populations, respectively, whereas the frequency of the wild-type allele was 27.3, 19.7 and 21.6% in Tunisian, Greek and Italian populations, respectively (Table 2). In contrast, in control subjects, the heterozygote frequency for 24-bp duplication was 25.7, 23.7 and 24% in Tunisian, Greek and Italian populations, respectively (Table 2). In the oldest old group, no subject was found homozygous for CHIT-1 deficiency, whereas in the control group, the incidence of homozygous (HH) mutant allele was 5.5, 4.3 and 3.2% in Tunisian, Greek and Italian populations, respectively. We also examined the Chit activity in plasma collected from oldest old subjects and from control subjects. In Tunisian, Greek and Italian oldest groups, the plasma Chit activity levels were higher in subjects homozygous for the wild-type allele than in those heterozygous for the mutant allele (Table 3; Figure 1a–c). In control subjects, the level of plasma Chit activity was comparable with that found in oldest old subjects, in relation to the allele composition (Table 3; Figure 1a–c).
Discussion
In this study, we compared the distribution of the CHIT-1 polymorphism genotype in two groups comprising different populations from the Mediterranean area: a longevity group (129 subjects) aged over 90 years and a control group aged 60–70 years. We found that the heterozygote frequency for a 24-bp duplication, leading to an in-frame deletion of 87 nucleotides and enzyme deficiency, was not significantly different among the oldest old subjects from different Mediterranean populations, whereas it was significantly different between oldest old subjects and control subjects, being highest among oldest old subjects and lowest among control groups. In the oldest old group, no subject was found homozygous for CHIT-1 deficiency, whereas in the control group, the incidence of HH mutant allele was 4.4% in Tunisians, 3.12% in Greeks and 5.31% in Italians. We also found that the mean enzymatic activity for the oldest subjects was lower than that in control groups. This study indicates that the heterozygosity of the 24-bp duplication in the CHIT-1 gene could have a protective effect in human longevity.
It is noteworthy that CHIT-1, as an important factor in inflammation,15 could have widespread effects on aging phenotypes, particularly on cardiovascular disease23, 24 and dementia,26, 27 and as such may influence the ability to achieve a long and healthy life. In fact, the baseline examination suggested that oldest old subjects were markedly healthier than controls, despite the fact that these subjects were, on an average, 30–37 years older. The oldest old subjects possessed significantly less age-related disease, including less prevalent CHD, stroke and degenerative diseases. They also had better self-rated health and generally high physical function, including less difficulty during walking. Interestingly, despite being more than three decades older than controls, the longevity cases had similar levels of cognitive function. This supports the existence of a ‘healthy aging’ phenotype in which individuals somehow delay or avoid major clinical disease and disability until late in life. Although previous studies have suggested that CHIT-1-deficient individuals show a certain degree of disadvantage, such as increased susceptibility to parasitic disease infections, to microorganisms containing chitin and to Gram-negative infections,17, 31, 32, 33, 34, 35 other studies indicate that CHIT-1 deficiency is not a disadvantage but rather a selective advantage.36, 37 Given the very high gene frequency of the main mutant allele, as shown in this study, it seems more likely that in humans, selection has occurred in the direction of decreasing or eliminating the activity of this enzyme. Therefore, it seems reasonable to look for an advantage, not of sufficient enzyme activity, but rather of deficient enzyme activity. In fact, in some Asian populations, the allele frequency of the insertion mutation is higher than that of the allele without the insertion.38 The evidence showing that chitins stimulate macrophages to produce interleukin (IL)-12, IL-18 and TNF-α39 supports the consideration that a deficiency of CHIT-1 confers a selective advantage. In addition, it has been demonstrated that chitins had T helper 1 (TH-1) adjuvant activity in developing immunity against a mycobacterial antigen,40 suggesting that Chit might modulate the circulating concentration of chitins and regulate immune responses. Therefore, Chit deficiency might provide individuals with an advantage in mounting an immune response against Mycobacterium. In summary, all evidence supports a potential role of CHIT-1 in human health, aging and longevity.
One of the major advantages of this study is that it used a nested case–control design. This study design selects cases and controls from an ongoing cohort study with longitudinally collected data. Therefore, several phenotypes of interest (for example, disease prevalence, health status and functions) were obtained by direct clinical examination when participants were younger, making the data less subject to recall bias. Undeniably, studies on exceptional survivors, such as centenarians, which have found evidence for phenotypes suggestive of slower aging, could suffer from significant recall bias. Namely, older participants may not precisely recall their past medical history and functional status. However, in this study, a morbidity committee adjudicated major diseases, and performance-based measures of physical and cognitive function were used to supplement self-reports, and evidence was found for such a healthy aging phenotype.
In conclusion, we found that a common, natural genetic variation within the CHIT-1 gene was strongly associated with human longevity and was also associated with several phenotypes of healthy aging. A further study of the CHIT-1 polymorphism and aging phenotypes is warranted in other populations.
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Acknowledgements
This study was supported by an FIRS grant No 9775 from MIUR (Ministero dell'Università e Ricerca Scientifica).
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Malaguarnera, L., Ohazuruike, L., Tsianaka, C. et al. Human chitotriosidase polymorphism is associated with human longevity in Mediterranean nonagenarians and centenarians. J Hum Genet 55, 8–12 (2010). https://doi.org/10.1038/jhg.2009.111
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DOI: https://doi.org/10.1038/jhg.2009.111
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