Neuroinformatics and Analysis of Traumatic Brain Injury and Related Conditions

go back to reference Bouchard, H. C., Sun, D., Dennis, E. L., Newsome, M. R., Disner, S. G., Elman, J., Silva, A., Velez, C., Irimia, A., Davenport, N. D., Sponheim, S. R., Franz, C. E., Kremen, W. S., Coleman, M. J., Williams, M. W., Geuze, E., Koerte, I. K., Shenton, M. E., Adamson, M. M., Coimbra, R., Grant, G., Shutter, L., George, M. S., Zafonte, R. D., McAllister, T. W., Stein, M. B., Thompson, P. M., Wilde, E. A., Tate, D. F., Sotiras, A., & Morey, R. A. (2022). Age-dependent white matter disruptions after military traumatic brain injury: Multivariate analysis results from ENIGMA brain injury. Human Brain Mapping, 43(8), 2653–2667. https://doi.org/10.1002/hbm.25811CrossRefPubMedPubMedCentral Bouchard, H. C., Sun, D., Dennis, E. L., Newsome, M. R., Disner, S. G., Elman, J., Silva, A., Velez, C., Irimia, A., Davenport, N. D., Sponheim, S. R., Franz, C. E., Kremen, W. S., Coleman, M. J., Williams, M. W., Geuze, E., Koerte, I. K., Shenton, M. E., Adamson, M. M., Coimbra, R., Grant, G., Shutter, L., George, M. S., Zafonte, R. D., McAllister, T. W., Stein, M. B., Thompson, P. M., Wilde, E. A., Tate, D. F., Sotiras, A., & Morey, R. A. (2022). Age-dependent white matter disruptions after military traumatic brain injury: Multivariate analysis results from ENIGMA brain injury. Human Brain Mapping, 43(8), 2653–2667. https://​doi.​org/​10.​1002/​hbm.​25811CrossRefPubMedPubMedCentral

go back to reference Dennis, E. L., Faskowitz, J., Rashid, F., Babikian, T., Mink, R., Babbitt, C., Johnson, J., Giza, C. C., Jahanshad, N., Thompson, P. M., & Asarnow, R. F. (2017). Diverging volumetric trajectories following pediatric traumatic brain injury. Neuroimage Clin, 15, 125–135. https://doi.org/10.1016/j.nicl.2017.03.014CrossRefPubMedPubMedCentral Dennis, E. L., Faskowitz, J., Rashid, F., Babikian, T., Mink, R., Babbitt, C., Johnson, J., Giza, C. C., Jahanshad, N., Thompson, P. M., & Asarnow, R. F. (2017). Diverging volumetric trajectories following pediatric traumatic brain injury. Neuroimage Clin, 15, 125–135. https://​doi.​org/​10.​1016/​j.​nicl.​2017.​03.​014CrossRefPubMedPubMedCentral

go back to reference Dennis, E. L., Baron, D., Bartnik-Olson, B., Caeyenberghs, K., Esopenko, C., Hillary, F. G., Kenney, K., Koerte, I. K., Lin, A. P., Mayer, A. R., Mondello, S., Olsen, A., Thompson, P. M., Tate, D. F., & Wilde, E. A. (2022). ENIGMA brain injury: Framework, challenges, and opportunities. Human Brain Mapping, 43(1), 149–166. https://doi.org/10.1002/hbm.25046CrossRefPubMed Dennis, E. L., Baron, D., Bartnik-Olson, B., Caeyenberghs, K., Esopenko, C., Hillary, F. G., Kenney, K., Koerte, I. K., Lin, A. P., Mayer, A. R., Mondello, S., Olsen, A., Thompson, P. M., Tate, D. F., & Wilde, E. A. (2022). ENIGMA brain injury: Framework, challenges, and opportunities. Human Brain Mapping, 43(1), 149–166. https://​doi.​org/​10.​1002/​hbm.​25046CrossRefPubMed

go back to reference Dennis, E. L., Newsome, M. R., Lindsey, H. M., Adamson, M., Austin, T. A., Disner, S. G., Eapen, B. C., Esopenko, C., Franz, C. E., Geuze, E., Haswell, C., Hinds, S. R. 2nd, Hodges, C. B., Irimia, A., Kenney, K., Koerte, I. K., Kremen, W. S., Levin, H. S., Morey, R. A., Ollinger, J., Rowland, J. A., Scheibel, R. S., Shenton, M. E., Sullivan, D. R., Talbert, L. D., Thomopoulos, S. I., Troyanskaya, M., Walker, W. C., Wang, X., Ware, A. L., Werner, J. K., Williams, W., Thompson, P. M., Tate, D. F., & Wilde, E. A. (2023). Altered lateralization of the cingulum in deployment-related traumatic brain injury: An ENIGMA military-relevant brain injury study. Human Brain Mapping, 44(5), 1888–1900. https://doi.org/10.1002/hbm.26179 Dennis, E. L., Newsome, M. R., Lindsey, H. M., Adamson, M., Austin, T. A., Disner, S. G., Eapen, B. C., Esopenko, C., Franz, C. E., Geuze, E., Haswell, C., Hinds, S. R. 2nd, Hodges, C. B., Irimia, A., Kenney, K., Koerte, I. K., Kremen, W. S., Levin, H. S., Morey, R. A., Ollinger, J., Rowland, J. A., Scheibel, R. S., Shenton, M. E., Sullivan, D. R., Talbert, L. D., Thomopoulos, S. I., Troyanskaya, M., Walker, W. C., Wang, X., Ware, A. L., Werner, J. K., Williams, W., Thompson, P. M., Tate, D. F., & Wilde, E. A. (2023). Altered lateralization of the cingulum in deployment-related traumatic brain injury: An ENIGMA military-relevant brain injury study. Human Brain Mapping, 44(5), 1888–1900. https://​doi.​org/​10.​1002/​hbm.​26179

go back to reference Goh, S. Y., Irimia, A., Torgerson, C. M., & Horn, J. D. (2014). Neuroinformatics challenges to the structural, connectomic, functional and electrophysiological multimodal imaging of human traumatic brain injury. Front Neuroinform, 8, 19. https://doi.org/10.3389/fninf.2014.00019CrossRefPubMedPubMedCentral Goh, S. Y., Irimia, A., Torgerson, C. M., & Horn, J. D. (2014). Neuroinformatics challenges to the structural, connectomic, functional and electrophysiological multimodal imaging of human traumatic brain injury. Front Neuroinform, 8, 19. https://​doi.​org/​10.​3389/​fninf.​2014.​00019CrossRefPubMedPubMedCentral

go back to reference Imms, P., Clemente, A., Deutscher, E., Radwan, A. M., Akhlaghi, H., Beech, P., Wilson, P. H., Irimia, A., Poudel, G., Duque, D., & Caeyenberghs, J. F., K (2023). Exploring personalized structural connectomics for moderate to severe traumatic brain injury. Netw Neurosci, 7(1), 160–183. https://doi.org/10.1162/netn_a_00277CrossRefPubMedPubMedCentral Imms, P., Clemente, A., Deutscher, E., Radwan, A. M., Akhlaghi, H., Beech, P., Wilson, P. H., Irimia, A., Poudel, G., Duque, D., & Caeyenberghs, J. F., K (2023). Exploring personalized structural connectomics for moderate to severe traumatic brain injury. Netw Neurosci, 7(1), 160–183. https://​doi.​org/​10.​1162/​netn_​a_​00277CrossRefPubMedPubMedCentral

go back to reference Irimia, A., Goh, S. Y., Torgerson, C. M., Stein, N. R., Chambers, M. C., Vespa, P. M., & Van Horn, J. D. (2013). Electroencephalographic inverse localization of brain activity in acute traumatic brain injury as a guide to surgery, monitoring and treatment. Clinical Neurology and Neurosurgery, 115(10), 2159–2165. https://doi.org/10.1016/j.clineuro.2013.08.003CrossRefPubMed Irimia, A., Goh, S. Y., Torgerson, C. M., Stein, N. R., Chambers, M. C., Vespa, P. M., & Van Horn, J. D. (2013). Electroencephalographic inverse localization of brain activity in acute traumatic brain injury as a guide to surgery, monitoring and treatment. Clinical Neurology and Neurosurgery, 115(10), 2159–2165. https://​doi.​org/​10.​1016/​j.​clineuro.​2013.​08.​003CrossRefPubMed

go back to reference Lizhnyak, P. N., & Ottens, A. K. (2015). Proteomics: In pursuit of effective traumatic brain injury therapeutics. Expert Review of Proteomics, 12(1), 75–82. https://doi.org/10.1586/14789450.2015.1000869CrossRefPubMedPubMedCentral Lizhnyak, P. N., & Ottens, A. K. (2015). Proteomics: In pursuit of effective traumatic brain injury therapeutics. Expert Review of Proteomics, 12(1), 75–82. https://​doi.​org/​10.​1586/​14789450.​2015.​1000869CrossRefPubMedPubMedCentral

go back to reference Maas, A. I. R., Menon, D. K., Manley, G. T., Abrams, M., Akerlund, C., Andelic, N., Aries, M., Bashford, T., Bell, M. J., Bodien, Y. G., Brett, B. L., Buki, A., Chesnut, R. M., Citerio, G., Clark, D., Clasby, B., Cooper, D. J., Czeiter, E., Czosnyka, M., Dams-O’Connor, K., De Keyser, V., Diaz-Arrastia, R., Ercole, A., van Essen, T. A., Falvey, E., Ferguson, A. R., Figaji, A., Fitzgerald, M., Foreman, B., Gantner, D., Gao, G., Giacino, J., Gravesteijn, B., Guiza, F., Gupta, D., Gurnell, M., Haagsma, J. A., Hammond, F. M., Hawryluk, G., van der Hutchinson, P., Jain, S., Jain, S., Jiang, J. Y., Kent, H., Kolias, A., Kompanje, E. J. O., Lecky, F., Lingsma, H. F., Maegele, M., Majdan, M., Markowitz, A., McCrea, M., Meyfroidt, G., Mikolic, A., Mondello, S., Mukherjee, P., Nelson, D., Nelson, L. D., Newcombe, V., Okonkwo, D., Oresic, M., Peul, W., Pisica, D., Polinder, S., Ponsford, J., Puybasset, L., Raj, R., Robba, C., Roe, C., Rosand, J., Schueler, P., Sharp, D. J., Smielewski, P., Stein, M. B., von Steinbuchel, N., Stewart, W., Steyerberg, E. W., Stocchetti, N., Temkin, N., Tenovuo, O., Theadom, A., Thomas, I., Espin, A. T., Turgeon, A. F., Unterberg, A., Van Praag, D., van Veen, E., Verheyden, J., Vyvere, T. V., Wang, K. K. W., Wiegers, E. J. A., Williams, W. H., Wilson, L., Wisniewski, S. R., Younsi, A., Yue, J. K., Yuh, E. L., Zeiler, F. A., Zeldovich, M., Zemek, R., & In, T. P. (2022). Investigators, Traumatic brain injury: progress and challenges in prevention, clinical care, and research. Lancet Neurol 21(11), 1004–1060. https://doi.org/10.1016/S1474-4422(22)00309-X Maas, A. I. R., Menon, D. K., Manley, G. T., Abrams, M., Akerlund, C., Andelic, N., Aries, M., Bashford, T., Bell, M. J., Bodien, Y. G., Brett, B. L., Buki, A., Chesnut, R. M., Citerio, G., Clark, D., Clasby, B., Cooper, D. J., Czeiter, E., Czosnyka, M., Dams-O’Connor, K., De Keyser, V., Diaz-Arrastia, R., Ercole, A., van Essen, T. A., Falvey, E., Ferguson, A. R., Figaji, A., Fitzgerald, M., Foreman, B., Gantner, D., Gao, G., Giacino, J., Gravesteijn, B., Guiza, F., Gupta, D., Gurnell, M., Haagsma, J. A., Hammond, F. M., Hawryluk, G., van der Hutchinson, P., Jain, S., Jain, S., Jiang, J. Y., Kent, H., Kolias, A., Kompanje, E. J. O., Lecky, F., Lingsma, H. F., Maegele, M., Majdan, M., Markowitz, A., McCrea, M., Meyfroidt, G., Mikolic, A., Mondello, S., Mukherjee, P., Nelson, D., Nelson, L. D., Newcombe, V., Okonkwo, D., Oresic, M., Peul, W., Pisica, D., Polinder, S., Ponsford, J., Puybasset, L., Raj, R., Robba, C., Roe, C., Rosand, J., Schueler, P., Sharp, D. J., Smielewski, P., Stein, M. B., von Steinbuchel, N., Stewart, W., Steyerberg, E. W., Stocchetti, N., Temkin, N., Tenovuo, O., Theadom, A., Thomas, I., Espin, A. T., Turgeon, A. F., Unterberg, A., Van Praag, D., van Veen, E., Verheyden, J., Vyvere, T. V., Wang, K. K. W., Wiegers, E. J. A., Williams, W. H., Wilson, L., Wisniewski, S. R., Younsi, A., Yue, J. K., Yuh, E. L., Zeiler, F. A., Zeldovich, M., Zemek, R., & In, T. P. (2022). Investigators, Traumatic brain injury: progress and challenges in prevention, clinical care, and research. Lancet Neurol 21(11), 1004–1060. https://​doi.​org/​10.​1016/​S1474-4422(22)00309-X

go back to reference Rostowsky, K. A., Irimia, A., & Alzheimer’s Disease Neuroimaging, I. (2021). Acute cognitive impairment after traumatic brain injury predicts the occurrence of brain atrophy patterns similar to those observed in Alzheimer’s disease. Geroscience, 43(4), 2015–2039. https://doi.org/10.1007/s11357-021-00355-9CrossRefPubMedPubMedCentral Rostowsky, K. A., Irimia, A., & Alzheimer’s Disease Neuroimaging, I. (2021). Acute cognitive impairment after traumatic brain injury predicts the occurrence of brain atrophy patterns similar to those observed in Alzheimer’s disease. Geroscience, 43(4), 2015–2039. https://​doi.​org/​10.​1007/​s11357-021-00355-9CrossRefPubMedPubMedCentral

go back to reference Zeiler, F. A., Iturria-Medina, Y., Thelin, E. P., Gomez, A., Shankar, J. J., Ko, J. H., Figley, C. R., Wright, G. E. B., & Anderson, C. M. (2021). Integrative neuroinformatics for Precision Prognostication and Personalized therapeutics in moderate and severe traumatic brain Injury. Frontiers in Neurology, 12, 729184. https://doi.org/10.3389/fneur.2021.729184CrossRefPubMedPubMedCentral Zeiler, F. A., Iturria-Medina, Y., Thelin, E. P., Gomez, A., Shankar, J. J., Ko, J. H., Figley, C. R., Wright, G. E. B., & Anderson, C. M. (2021). Integrative neuroinformatics for Precision Prognostication and Personalized therapeutics in moderate and severe traumatic brain Injury. Frontiers in Neurology, 12, 729184. https://​doi.​org/​10.​3389/​fneur.​2021.​729184CrossRefPubMedPubMedCentral